RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 BHLHE41Q9C0J9 482 aaPredicted RBP17.04■□□□□ 0.32
VARS-220ENST00000461874 ZNF395Q9H8N7 513 aaPredicted RBP17.04■□□□□ 0.32
VARS-220ENST00000461874 SSU72Q9NP77 194 aaKnown RBP17.04■□□□□ 0.32
VARS-220ENST00000461874 MED17Q9NVC6 651 aa17.04■□□□□ 0.32
VARS-220ENST00000461874 GPATCH2Q9NW75 528 aa17.04■□□□□ 0.32
VARS-220ENST00000461874 PLEKHA6Q9Y2H5 1048 aa17.04■□□□□ 0.32
VARS-220ENST00000461874 C2CD3Q4AC94 2353 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 MAP1AP78559 2803 aaPredicted RBP17.03■□□□□ 0.32
VARS-220ENST00000461874 C7orf72A4D263 438 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 ZNF500O60304 480 aaPredicted RBP17.03■□□□□ 0.32
VARS-220ENST00000461874 SOX30O94993 753 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 DNASE1P24855 282 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 PSMA4P25789 261 aaKnown RBP17.03■□□□□ 0.32
VARS-220ENST00000461874 CPOXP36551 454 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 CLDN8P56748 225 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 FAM27E3Q08E93 113 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 MAD2L1Q13257 205 aaPredicted RBP17.03■□□□□ 0.32
VARS-220ENST00000461874 TP53BP2Q13625 1128 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 CD226Q15762 336 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 CHI3L2Q15782 390 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 SGCBQ16585 318 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 SMU1Q2TAY7 513 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 PLPPR5Q32ZL2 321 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 SPDYE7PQ495Y7 208 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 ZNF474Q6S9Z5 364 aaPredicted RBP17.03■□□□□ 0.32
VARS-220ENST00000461874 WDR75Q8IWA0 830 aaKnown RBP17.03■□□□□ 0.32
VARS-220ENST00000461874 SFXN5Q8TD22 340 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 ADAMTS15Q8TE58 950 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 ZBTB8AQ96BR9 441 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 SH3YL1Q96HL8 342 aaPredicted RBP17.03■□□□□ 0.32
VARS-220ENST00000461874 NPAS1Q99742 590 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 DUSP26Q9BV47 211 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 NEUROD4Q9HD90 331 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 ASIC5Q9NY37 505 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 NDRG3Q9UGV2 375 aa17.03■□□□□ 0.32
VARS-220ENST00000461874 FAF1Q9UNN5 650 aaPredicted RBP17.03■□□□□ 0.32
VARS-220ENST00000461874 NUP214P35658 2090 aaPredicted RBP17.02■□□□□ 0.32
VARS-220ENST00000461874 EIF1AYO14602 144 aaKnown RBP17.02■□□□□ 0.32
VARS-220ENST00000461874 AQP8O94778 261 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 CGAP01215 116 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 HRGP04196 525 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 KRT16P08779 473 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 DHRS4L1P0CG22 281 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 FCGR2AP12318 317 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 ATP6V1C1P21283 382 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 EIF1AXP47813 144 aaKnown RBP17.02■□□□□ 0.32
VARS-220ENST00000461874 ZNF41P51814 821 aaPredicted RBP17.02■□□□□ 0.32
VARS-220ENST00000461874 ABCE1P61221 599 aaKnown RBP17.02■□□□□ 0.32
VARS-220ENST00000461874 SIRPAP78324 504 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 FGFBP1Q14512 234 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 GUSBP1Q15486 140 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 PAMR1Q6UXH9 720 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 CAMKMTQ7Z624 323 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 ZNF781Q8N8C0 355 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 B4GALNT2Q8NHY0 566 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 MOAP1Q96BY2 351 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 ADGRG7Q96K78 797 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 KLHDC3Q9BQ90 382 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 HOXD1Q9GZZ0 328 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 OPN3Q9H1Y3 402 aaPredicted RBP17.02■□□□□ 0.32
VARS-220ENST00000461874 AKTIPQ9H8T0 292 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 PLEKHF2Q9H8W4 249 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 NOP53Q9NZM5 478 aaKnown RBP17.02■□□□□ 0.32
VARS-220ENST00000461874 RAB21Q9UL25 225 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.02■□□□□ 0.32
VARS-220ENST00000461874 TESMINQ9Y4I5 508 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 KCNE3Q9Y6H6 103 aa17.02■□□□□ 0.32
VARS-220ENST00000461874 SETD2Q9BYW2 2564 aaPredicted RBP17.01■□□□□ 0.31
VARS-220ENST00000461874 CASKO14936 926 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 ADAMDEC1O15204 470 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 TM9SF1O15321 606 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 CFLARO15519 480 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 MYZAPP0CAP1 466 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 CD8BP10966 210 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 CD79BP40259 229 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 SLC6A8P48029 635 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 RAC1P63000 192 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 HBA1P69905 142 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 PDCD2Q16342 344 aaPredicted RBP17.01■□□□□ 0.31
VARS-220ENST00000461874 CTU2Q2VPK5 515 aaKnown RBP17.01■□□□□ 0.31
VARS-220ENST00000461874 PGS1Q32NB8 556 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 KLHL26Q53HC5 615 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 TNFAIP8L3Q5GJ75 292 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 DCST2Q5T1A1 773 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 MTERF4Q7Z6M4 381 aaKnown RBP17.01■□□□□ 0.31
VARS-220ENST00000461874 OR10D3Q8NH80 312 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 POC1BQ8TC44 478 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 MBD6Q96DN6 1003 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 RNF145Q96MT1 663 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 SLC39A3Q9BRY0 314 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 C20orf27Q9GZN8 174 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 ELOVL5Q9NYP7 299 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 RAP2CQ9Y3L5 183 aa17.01■□□□□ 0.31
VARS-220ENST00000461874 SNUPNO95149 360 aaKnown RBP17■□□□□ 0.31
VARS-220ENST00000461874 OPN1LWP04000 364 aa17■□□□□ 0.31
VARS-220ENST00000461874 LINGO3P0C6S8 592 aa17■□□□□ 0.31
VARS-220ENST00000461874 ZNF117Q03924 483 aa17■□□□□ 0.31
VARS-220ENST00000461874 MPP2Q14168 576 aa17■□□□□ 0.31
VARS-220ENST00000461874 POU4F3Q15319 338 aa17■□□□□ 0.31
VARS-220ENST00000461874 CEP85LQ5SZL2 805 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms