RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 PM20D2Q8IYS1 436 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 ZNF619Q8N2I2 560 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 B4GALNT2Q8NHY0 566 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 OIT3Q8WWZ8 545 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 C1GALT1C1Q96EU7 318 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 TRNT1Q96Q11 434 aaKnown RBP16.71■□□□□ 0.27
DDR1-241ENST00000460944 VKORC1Q9BQB6 163 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 UGT2B28Q9BY64 529 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 FAM107BQ9H098 131 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 SAR1AQ9NR31 198 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 ALKBH4Q9NXW9 302 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.71■□□□□ 0.27
DDR1-241ENST00000460944 RPH3AQ9Y2J0 694 aaPredicted RBP16.71■□□□□ 0.27
DDR1-241ENST00000460944 PTPN13Q12923 2485 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 B4DXG7 233 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 TNFRSF21O75509 655 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 H6PDO95479 791 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 ETFAP13804 333 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 GABRA1P14867 456 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 HOXB9P17482 250 aaPredicted RBP16.7■□□□□ 0.26
DDR1-241ENST00000460944 BMP7P18075 431 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 MVDP53602 400 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 SEC24CP53992 1094 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 GYS2P54840 703 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 FADDQ13158 208 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 GNA13Q14344 377 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 ZNF141Q15928 474 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 SYPL1Q16563 259 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 VASNQ6EMK4 673 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 TMEM211Q6ICI0 200 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 RPTNQ6XPR3 784 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 FRRS1Q6ZNA5 592 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 LRRC74BQ6ZQY2 392 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 OLIG3Q7RTU3 272 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 SPATA21Q7Z572 469 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 CPLX4Q7Z7G2 160 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 DHDDSQ86SQ9 333 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 ANKFN1Q8N957 763 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 PHF10Q8WUB8 498 aaKnown RBP16.7■□□□□ 0.26
DDR1-241ENST00000460944 CCDC120Q96HB5 630 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 SAP130Q9H0E3 1048 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 SLC25A37Q9NYZ2 338 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 CALML5Q9NZT1 146 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 CORO2BQ9UQ03 480 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 CAPN7Q9Y6W3 813 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 ICE1Q9Y2F5 2266 aa16.7■□□□□ 0.26
DDR1-241ENST00000460944 HEATR5AQ86XA9 2040 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 GMNCA6NCL1 334 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 SERINC4A6NH21 518 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 EVPLLA8MZ36 301 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 ZG16O60844 167 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 UGT2B17O75795 530 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 ZIC2O95409 532 aaPredicted RBP16.69■□□□□ 0.26
DDR1-241ENST00000460944 HOXD4P09016 255 aaPredicted RBP16.69■□□□□ 0.26
DDR1-241ENST00000460944 UBL4AP11441 157 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 CD1EP15812 388 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 CHMP24386 653 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 ACVR2AP27037 513 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 ADSLP30566 484 aaPredicted RBP16.69■□□□□ 0.26
DDR1-241ENST00000460944 PTGER4P35408 488 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 RNF144AP50876 292 aaPredicted RBP16.69■□□□□ 0.26
DDR1-241ENST00000460944 CRISP3P54108 245 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 SUMO3P55854 103 aaPredicted RBP16.69■□□□□ 0.26
DDR1-241ENST00000460944 CHRNEQ04844 493 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 KLF10Q13118 480 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 NFYCQ13952 458 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 SF3B4Q15427 424 aaKnown RBP eCLIP16.69■□□□□ 0.269e-6■■□□□ 14.4
DDR1-241ENST00000460944 RGNQ15493 299 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 EMC4Q5J8M3 183 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 DPP10Q8N608 796 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 TMCO5AQ8N6Q1 288 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 TIMP4Q99727 224 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 ELAC2Q9BQ52 826 aaKnown RBP16.69■□□□□ 0.26
DDR1-241ENST00000460944 PIGQQ9BRB3 760 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 VAPAQ9P0L0 249 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 SLAMF8Q9P0V8 285 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 CAMK2AQ9UQM7 478 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 VDAC3Q9Y277 283 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 ARHGAP21Q5T5U3 1957 aa16.69■□□□□ 0.26
DDR1-241ENST00000460944 NCOA6Q14686 2063 aaPredicted RBP16.68■□□□□ 0.26
DDR1-241ENST00000460944 A0A087WZY1 265 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 PRAMEF27A3QJZ7 478 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 LINC01387J3KSC0 135 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 SLC22A2O15244 555 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 ZNF264O43296 627 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 ZIC3O60481 467 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 EIF4E2O60573 245 aaKnown RBP16.68■□□□□ 0.26
DDR1-241ENST00000460944 CCDC22O60826 627 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 NUDT14O95848 222 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 BCHEP06276 602 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 CHRM4P08173 479 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 P2RX1P51575 399 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 SMSP52788 366 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 GFRA1P56159 465 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 ZNF117Q03924 483 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 MMEL1Q495T6 779 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 GLYR1Q49A26 553 aaPredicted RBP16.68■□□□□ 0.26
DDR1-241ENST00000460944 C1orf185Q5T7R7 199 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 B3GNT6Q6ZMB0 384 aa16.68■□□□□ 0.26
DDR1-241ENST00000460944 EIF3MQ7L2H7 374 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms