RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 PGGHGQ32M88 737 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 CNIH2Q6PI25 160 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 LYSMD2Q8IV50 215 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 MEIOBQ8N635 442 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 MFSD9Q8NBP5 474 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 SLC37A3Q8NCC5 494 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 TMEM255BQ8WV15 326 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 ZNF707Q96C28 371 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 BPIFA2Q96DR5 249 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 POLDIP3Q9BY77 421 aaKnown RBP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 C8orf33Q9H7E9 229 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 PLCXD1Q9NUJ7 323 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 CCDC59Q9P031 241 aaKnown RBP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 ZNF443Q9Y2A4 671 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 YARS2Q9Y2Z4 477 aaKnown RBP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 RP1P56715 2156 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 INMT-MINDY4F8WBC2 141 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 GPX5O75715 221 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 KLHL18O94889 574 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 IGHA2P01877 340 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 SCG5P05408 212 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 ACP2P11117 423 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 CXCR1P25024 350 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 TOMM20Q15388 145 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 CAMKMTQ7Z624 323 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 OR8H1Q8NGG4 311 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 OR52I1Q8NGK6 324 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 SFXN5Q8TD22 340 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 THEM6Q8WUY1 208 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 ZC4H2Q9NQZ6 224 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 CDH10Q9Y6N8 788 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 MKI67P46013 3256 aaKnown RBP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 A0A075B6Q4 140 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 FAM172BPA6NC97 362 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 ANXA2P2A6NMY6 339 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 SERPINA3P01011 423 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 EGFP01133 1207 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 ANXA2P07355 339 aaKnown RBP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 HOXB3P14651 431 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 OPRD1P41143 372 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 PSMD4P55036 377 aaKnown RBP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 GPR18Q14330 331 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 PUM1Q14671 1186 aaKnown RBP eCLIP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 OXA1LQ15070 435 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 TRMT12Q53H54 448 aaKnown RBP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 SYT14P1Q58G82 188 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 KIAA1211LQ6NV74 962 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 LACC1Q8IV20 430 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 CELF2-AS1Q8N7Q2 184 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 YIPF7Q8N8F6 280 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 Q8N9G6 341 aaPredicted RBP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 OR5T3Q8NGG3 340 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 TRIM2Q9C040 744 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 ABCG5Q9H222 651 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 COPS7AQ9UBW8 275 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 NUFIP1Q9UHK0 495 aaKnown RBP10.87□□□□□ -0.67
NPHP4-204ENST00000460696 ICKQ9UPZ9 632 aa10.87□□□□□ -0.67
NPHP4-204ENST00000460696 OR5K4A6NMS3 321 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 C11orf98E9PRG8 122 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 NPC1O15118 1278 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 PDGFBP01127 241 aaPredicted RBP10.86□□□□□ -0.67
NPHP4-204ENST00000460696 UGT2B7P16662 529 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 PCMT1P22061 227 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 IGFALSP35858 605 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 EIF2DP41214 584 aaKnown RBP10.86□□□□□ -0.67
NPHP4-204ENST00000460696 TAF13Q15543 124 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 FXNQ16595 210 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 AGBL4Q5VU57 503 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 ZNF550Q7Z398 422 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 NLRP8Q86W28 1048 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 ZNF619Q8N2I2 560 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 OR52R1Q8NGF1 315 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 ALOXE3Q9BYJ1 711 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 CHIAQ9BZP6 476 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 SEMA4GQ9NTN9 838 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 TXNL4BQ9NX01 149 aaKnown RBP10.86□□□□□ -0.67
NPHP4-204ENST00000460696 PAQR5Q9NXK6 330 aaPredicted RBP10.86□□□□□ -0.67
NPHP4-204ENST00000460696 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.86□□□□□ -0.67
NPHP4-204ENST00000460696 IQCMA0A1B0GVH7 501 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 A0A1W2PRQ8 180 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 GXYLT2A0PJZ3 443 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 TSPAN11A1L157 253 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 FAM47E-STBD1D6RA91 191 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 M0R082 166 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 SOCS6O14544 535 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 FLRT2O43155 660 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 GPR75O95800 540 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 LGI1O95970 557 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 YES1P07947 543 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 UGT2B10P36537 528 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 MNDAP41218 407 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 TGM4P49221 684 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 ADPRHP54922 357 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 OR1Q1Q15612 314 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 NDUFA5Q16718 116 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 ADGRF3Q8IZF5 1079 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 LINC01555Q8NAE3 123 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 ZNF527Q8NB42 609 aa10.86□□□□□ -0.67
NPHP4-204ENST00000460696 SDR9C7Q8NEX9 313 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms