RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 LRFN5Q96NI6 719 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 SCN2AQ99250 2005 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 TRIM2Q9C040 744 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 FOLH1BQ9HBA9 442 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 ISYNA1Q9NPH2 558 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-205ENST00000460485 GPR83Q9NYM4 423 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 IL20Q9NYY1 176 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 SUSD2Q9UGT4 822 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 DIMT1Q9UNQ2 313 aaKnown RBP13.09□□□□□ -0.31
ERCC3-205ENST00000460485 HEMK1Q9Y5R4 338 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-205ENST00000460485 HELZ2Q9BYK8 2649 aaKnown RBP13.09□□□□□ -0.31
ERCC3-205ENST00000460485 FAM227AF5H4B4 570 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 KHNYNO15037 678 aaKnown RBP13.08□□□□□ -0.32
ERCC3-205ENST00000460485 BCAT2O15382 392 aaPredicted RBP13.08□□□□□ -0.32
ERCC3-205ENST00000460485 YKT6O15498 198 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 KLF4O43474 513 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 FOXS1O43638 330 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 AIREO43918 545 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 ZIC2O95409 532 aaPredicted RBP13.08□□□□□ -0.32
ERCC3-205ENST00000460485 SOX14O95416 240 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 RAB36O95755 333 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 STSP08842 583 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 PNLIPP16233 465 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 ZNF182P17025 639 aaPredicted RBP13.08□□□□□ -0.32
ERCC3-205ENST00000460485 TNNI3P19429 210 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 ENDOUP21128 410 aaKnown RBP13.08□□□□□ -0.32
ERCC3-205ENST00000460485 SOX18P35713 384 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 ARRB1P49407 418 aaPredicted RBP13.08□□□□□ -0.32
ERCC3-205ENST00000460485 ZNF136P52737 540 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 PPP1CAP62136 330 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 FUT7Q11130 342 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 ZNF846Q147U1 533 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 ZNF141Q15928 474 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 MINDY4Q4G0A6 757 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 C3orf38Q5JPI3 329 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 MRPL2Q5T653 305 aaKnown RBP13.08□□□□□ -0.32
ERCC3-205ENST00000460485 ZNF761Q86XN6 746 aaPredicted RBP13.08□□□□□ -0.32
ERCC3-205ENST00000460485 SLITRK4Q8IW52 837 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 ABCA7Q8IZY2 2146 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 TMEM52Q8NDY8 209 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 PROKR2Q8NFJ6 384 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 OR52L1Q8NGH7 329 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 BRIX1Q8TDN6 353 aaKnown RBP13.08□□□□□ -0.32
ERCC3-205ENST00000460485 UBE2FQ969M7 185 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 DACH2Q96NX9 599 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 HOXD1Q9GZZ0 328 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 MIR1-1HGQ9H1L0 117 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 FN3KQ9H479 309 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 TMEM27Q9HBJ8 222 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 FBXO8Q9NRD0 319 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 CCDC59Q9P031 241 aaKnown RBP13.08□□□□□ -0.32
ERCC3-205ENST00000460485 MRTO4Q9UKD2 239 aaKnown RBP13.08□□□□□ -0.32
ERCC3-205ENST00000460485 BAIAP2Q9UQB8 552 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 CHST2Q9Y4C5 530 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 FREM2Q5SZK8 3169 aa13.08□□□□□ -0.32
ERCC3-205ENST00000460485 ITPR1Q14643 2758 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 A0A0A6YYC8 382 aaPredicted RBP13.07□□□□□ -0.32
ERCC3-205ENST00000460485 EFCAB9A8MZ26 197 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 KDM4EB2RXH2 506 aaPredicted RBP13.07□□□□□ -0.32
ERCC3-205ENST00000460485 TMEM150CB9EJG8 249 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 I3L1I5 382 aaPredicted RBP13.07□□□□□ -0.32
ERCC3-205ENST00000460485 CCRL2O00421 344 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 CHP2O43745 196 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 ENTPD6O75354 484 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 KCNK2O95069 426 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 RCBTB2O95199 551 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 LCKP06239 509 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 INHBBP09529 407 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 DBTP11182 482 aaKnown RBP13.07□□□□□ -0.32
ERCC3-205ENST00000460485 GLB1P16278 677 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 DRD5P21918 477 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 C21orf33P30042 268 aaPredicted RBP13.07□□□□□ -0.32
ERCC3-205ENST00000460485 GABRA3P34903 492 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 GRK5P34947 590 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 PTGER1P34995 402 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 CAPZA2P47755 286 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 ARL4DP49703 201 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 NUDT6P53370 316 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 HSD11B2P80365 405 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 EFNB1P98172 346 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 ZNF91Q05481 1191 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 AQP6Q13520 282 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 SPCS2Q15005 226 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 GPR68Q15743 365 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 SNAPC1Q16533 368 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.07□□□□□ -0.32
ERCC3-205ENST00000460485 DEFB110Q30KQ9 67 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 FLYWCH1Q4VC44 716 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 WDR74Q6RFH5 385 aaPredicted RBP13.07□□□□□ -0.32
ERCC3-205ENST00000460485 C19orf48Q6RUI8 117 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 ZNF620Q6ZNG0 422 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 QSOX2Q6ZRP7 698 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 GID4Q8IVV7 300 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 CLIP4Q8N3C7 705 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 AMER2Q8N7J2 671 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 FRMD1Q8N878 549 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 TCEANCQ8N8B7 351 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 OR52R1Q8NGF1 315 aa13.07□□□□□ -0.32
ERCC3-205ENST00000460485 DYNC2LI1Q8TCX1 351 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms