RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 FNDC7Q5VTL7 733 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 FAM91A1Q658Y4 838 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 ZNF550Q7Z398 422 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 WDR53Q7Z5U6 358 aaPredicted RBP9.74□□□□□ -0.85
UBR4-208ENST00000459947 ANKS4BQ8N8V4 417 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 WDSUB1Q8N9V3 476 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 C11orf65Q8NCR3 313 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 OR5D16Q8NGK9 328 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 PRR7Q8TB68 274 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 SSC4DQ8WTU2 575 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 RASSF5Q8WWW0 418 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 LRRC46Q96FV0 321 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 PRDM14Q9GZV8 571 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 SERPINB7O75635 380 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 CPN1P15169 458 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 C1orf185Q5T7R7 199 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 GKAP1Q5VSY0 366 aaPredicted RBP9.73□□□□□ -0.85
UBR4-208ENST00000459947 CHMP1BQ7LBR1 199 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 MARCH3Q86UD3 253 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 GTPBP8Q8N3Z3 284 aaPredicted RBP9.73□□□□□ -0.85
UBR4-208ENST00000459947 ZNF808Q8N4W9 903 aaPredicted RBP9.73□□□□□ -0.85
UBR4-208ENST00000459947 HIPK4Q8NE63 616 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 TNIP2Q8NFZ5 429 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 OR5W2Q8NH69 310 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 DUSP19Q8WTR2 217 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 MRGPRX4Q96LA9 322 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 ANKRD27Q96NW4 1050 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 EFCAB1Q9HAE3 211 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 SERINC1Q9NRX5 453 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 SLC13A4Q9UKG4 626 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 C9JVG2 144 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 CSTAP01040 98 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 IFNA14P01570 189 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 RPS4Y1P22090 263 aaKnown RBP9.73□□□□□ -0.85
UBR4-208ENST00000459947 GPR68Q15743 365 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 VASNQ6EMK4 673 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 TYW3Q6IPR3 259 aaKnown RBP9.73□□□□□ -0.85
UBR4-208ENST00000459947 REEP3Q6NUK4 255 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 XKRXQ6PP77 449 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 FRRS1Q6ZNA5 592 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 PATL1Q86TB9 770 aaKnown RBP9.73□□□□□ -0.85
UBR4-208ENST00000459947 LACC1Q8IV20 430 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 ZPLD1Q8TCW7 415 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 HOPXQ9BPY8 73 aaPredicted RBP9.73□□□□□ -0.85
UBR4-208ENST00000459947 GALNT9Q9HCQ5 603 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 KLHL28Q9NXS3 571 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 HCRTR2O43614 444 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 RPS26P62854 115 aaKnown RBP9.73□□□□□ -0.85
UBR4-208ENST00000459947 RIPPLY2Q5TAB7 128 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 RNF220Q5VTB9 566 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 BICRALQ6AI39 1079 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 SLC25A43Q8WUT9 341 aaPredicted RBP9.73□□□□□ -0.85
UBR4-208ENST00000459947 TACO1Q9BSH4 297 aaKnown RBP9.73□□□□□ -0.85
UBR4-208ENST00000459947 FAM53CQ9NYF3 392 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 COQ3Q9NZJ6 369 aa9.73□□□□□ -0.85
UBR4-208ENST00000459947 AGAP5A6NIR3 686 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 H6PDO95479 791 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 FCGR2AP12318 317 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 ME2P23368 584 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 ACVR2AP27037 513 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 RFC3P40938 356 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 DLX5P56178 289 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 CRYZQ08257 329 aaKnown RBP9.72□□□□□ -0.85
UBR4-208ENST00000459947 MRPL49Q13405 166 aaKnown RBP9.72□□□□□ -0.85
UBR4-208ENST00000459947 UBAP2LQ14157 1087 aaKnown RBP9.72□□□□□ -0.85
UBR4-208ENST00000459947 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.72□□□□□ -0.85
UBR4-208ENST00000459947 CCNJQ5T5M9 372 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 NET1Q7Z628 596 aaPredicted RBP9.72□□□□□ -0.85
UBR4-208ENST00000459947 SERPINA11Q86U17 422 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 CD163Q86VB7 1156 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 SNX32Q86XE0 403 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 GRAMD2AQ8IUY3 354 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 ZNF614Q8N883 585 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 RAB8BQ92930 207 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 SLC6A15Q9H2J7 730 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 CALHM2Q9HA72 323 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 ZNF175Q9Y473 711 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 DSPPQ9NZW4 1301 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 CCL21O00585 134 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 TNFRSF21O75509 655 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 SLC6A2P23975 617 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 ST13P50502 369 aaKnown RBP9.72□□□□□ -0.85
UBR4-208ENST00000459947 CYP51A1Q16850 503 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 SPATS1Q496A3 300 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 SLC25A53Q5H9E4 307 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 RAET1LQ5VY80 246 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 REP15Q6BDI9 236 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 TMCO5AQ8N6Q1 288 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 FAM71CQ8NEG0 241 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 OR4C3Q8NH37 302 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 GNRHR2Q96P88 292 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 UCN2Q96RP3 112 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 TIGARQ9NQ88 270 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 MEMO1Q9Y316 297 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 HSPB2A8KAH6 182 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 H0Y3Z8 333 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 FAM107AO95990 144 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 TFPTP0C1Z6 253 aa9.72□□□□□ -0.85
UBR4-208ENST00000459947 POU3F2P20265 443 aaPredicted RBP9.72□□□□□ -0.85
UBR4-208ENST00000459947 CLK1P49759 484 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms