RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 PEPDP12955 493 aa18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 F3P13726 295 aa18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 POU3F3P20264 500 aaPredicted RBP18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 MAB21L1Q13394 359 aa18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 PUS10Q3MIT2 529 aaKnown RBP18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 SLC48A1Q6P1K1 146 aa18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 CEACAM19Q7Z692 300 aa18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 TCTE3Q8IZS6 198 aa18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 LINC00471Q8N535 108 aa18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 TMIEQ8NEW7 156 aa18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 AKAP1Q92667 903 aaKnown RBP eCLIP18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 GCDHQ92947 438 aaPredicted RBP18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 KIAA1143Q96AT1 154 aaPredicted RBP18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 TEX12Q9BXU0 123 aa18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 PCBD2Q9H0N5 130 aa18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 SLC6A17Q9H1V8 727 aa18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 MRPS18AQ9NVS2 196 aaKnown RBP18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 MAT2BQ9NZL9 334 aa18.24■□□□□ 0.51
CNEP1R1-203ENST00000458059 SEC14L5O43304 696 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 SAGP10523 405 aaPredicted RBP18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 MAKP20794 623 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 TALDO1P37837 337 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 MAPK14Q16539 360 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 ZNF765Q7L2R6 523 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 ADGRD2Q7Z7M1 963 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 ARL14Q8N4G2 192 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 RFLNBQ8N5W9 214 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 ACBD7Q8N6N7 88 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 OR13C2Q8NGS9 318 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 TRIM63Q969Q1 353 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 ABHD1Q96SE0 405 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 SOSTQ9BQB4 213 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 IFT27Q9BW83 186 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 C11orf49Q9H6J7 331 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 PRSS16Q9NQE7 514 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 IRGMA1A4Y4 181 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 PEX12O00623 359 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 CHST10O43529 356 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 EFCAB14O75071 495 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 C1QBP02746 253 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 HTR1FP30939 366 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 ANXA11P50995 505 aaKnown RBP18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 RPA4Q13156 261 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 IRF4Q15306 451 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 DEFB134Q4QY38 66 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 ANKRD54Q6NXT1 300 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 FIGNL1Q6PIW4 674 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 THSD4Q6ZMP0 1018 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 ZNF836Q6ZNA1 936 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 ELMOD2Q8IZ81 293 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 RAB42Q8N4Z0 105 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 FANK1Q8TC84 345 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 ARHGDIGQ99819 225 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 MARVELD1Q9BSK0 173 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 IL20Q9NYY1 176 aa18.23■□□□□ 0.51
CNEP1R1-203ENST00000458059 RGS9O75916 674 aaPredicted RBP18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 DDX6P26196 483 aaKnown RBP eCLIP18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 CCR6P51684 374 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 OR12D2P58182 307 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 GNA13Q14344 377 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 FRRS1Q6ZNA5 592 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 MTSS1LQ765P7 747 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 DUSP18Q8NEJ0 188 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 RFT1Q96AA3 541 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 ORAI3Q9BRQ5 295 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 PAK6Q9NQU5 681 aaPredicted RBP18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 KLHL21Q9UJP4 597 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 NCKAP1Q9Y2A7 1128 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 FKTNO75072 461 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 ZNF888P0CJ79 500 aaPredicted RBP18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 FPR3P25089 353 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 SSTR2P30874 369 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 DUSP5Q16690 384 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 TRMT12Q53H54 448 aaKnown RBP18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 PSRC1Q6PGN9 363 aaPredicted RBP18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 GALNT6Q8NCL4 622 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 OR2L5Q8NG80 312 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 OR4D9Q8NGE8 314 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 OR5W2Q8NH69 310 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 HCAR2Q8TDS4 363 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 MED28Q9H204 178 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 PRKAG2Q9UGJ0 569 aa18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 ZNF443Q9Y2A4 671 aaPredicted RBP18.22■□□□□ 0.51
CNEP1R1-203ENST00000458059 SERPINI2O75830 405 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 TRIOO75962 3097 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 TOXO94900 526 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 TEAD1P28347 426 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 PEBP1P30086 187 aaKnown RBP18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 DRD3P35462 400 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 FGL2Q14314 439 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 MLC1Q15049 377 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 NTRK2Q16620 822 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 SDE2Q6IQ49 451 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 PRSS45Q7RTY3 260 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 ETFBKMTQ8IXQ9 262 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 OR2L3Q8NG85 312 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 PIGKQ92643 395 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 MS4A3Q96HJ5 214 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 C4orf36Q96KX1 117 aa18.21■□□□□ 0.51
CNEP1R1-203ENST00000458059 GON7Q9BXV9 100 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms