RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SAMD8Q96LT4 415 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 NPAS1Q99742 590 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 DPYSL5Q9BPU6 564 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 SPATA5L1Q9BVQ7 753 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 ACTR6Q9GZN1 396 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 LRRN3Q9H3W5 708 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 NPDC1Q9NQX5 325 aaPredicted RBP9.62□□□□□ -0.87
CLIP4-208ENST00000456385 ZNF175Q9Y473 711 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 DNAH14Q0VDD8 3507 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 DAPL1A0PJW8 107 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 PRKRAO75569 313 aaKnown RBP9.61□□□□□ -0.87
CLIP4-208ENST00000456385 KDM4BO94953 1096 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 CTSAP10619 480 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 FUT1P19526 365 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 PAICSP22234 425 aaKnown RBP9.61□□□□□ -0.87
CLIP4-208ENST00000456385 PPP2R1BP30154 601 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 OC90Q02509 493 aaPredicted RBP9.61□□□□□ -0.87
CLIP4-208ENST00000456385 ZNF169Q14929 603 aaPredicted RBP9.61□□□□□ -0.87
CLIP4-208ENST00000456385 POM121L1PQ3SYA9 428 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 CDC73Q6P1J9 531 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 CXXC5Q7LFL8 322 aaKnown RBP9.61□□□□□ -0.87
CLIP4-208ENST00000456385 NRMQ8IXM6 262 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 CFAP206Q8IYR0 622 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 GANCQ8TET4 914 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 AUTS2Q8WXX7 1259 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 SORCS1Q8WY21 1168 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 OVCA2Q8WZ82 227 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 SLC35G5Q96KT7 338 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 SGPP1Q9BX95 441 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 TTTY10Q9BZA0 68 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 TTYH1Q9H313 450 aaPredicted RBP9.61□□□□□ -0.87
CLIP4-208ENST00000456385 TRIM36Q9NQ86 728 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 ZCCHC3Q9NUD5 404 aaKnown RBP9.61□□□□□ -0.87
CLIP4-208ENST00000456385 IL20Q9NYY1 176 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 NTMQ9P121 344 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 ZNF69Q9UC07 566 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 PFDN2Q9UHV9 154 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 PLAGL1Q9UM63 463 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 ENTPD4Q9Y227 616 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 GLOD5A6NK44 160 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 FAM74A7A6NL05 159 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 DNASE2O00115 360 aaPredicted RBP9.61□□□□□ -0.87
CLIP4-208ENST00000456385 ARPC5O15511 151 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 TMPRSS11DO60235 418 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 SUSD5O60279 629 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 SIX6O95475 246 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 TGM6O95932 706 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 THY1P04216 161 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 HOXB3P14651 431 aaPredicted RBP9.61□□□□□ -0.87
CLIP4-208ENST00000456385 ANXA7P20073 488 aaKnown RBP9.61□□□□□ -0.87
CLIP4-208ENST00000456385 RAB3BP20337 219 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 MAZP56270 477 aaKnown RBP9.61□□□□□ -0.87
CLIP4-208ENST00000456385 BDH1Q02338 343 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 TMEM115Q12893 351 aaPredicted RBP9.61□□□□□ -0.87
CLIP4-208ENST00000456385 LASP1Q14847 261 aaKnown RBP9.61□□□□□ -0.87
CLIP4-208ENST00000456385 FAM74A3Q4VXF1 159 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 ACSM3Q53FZ2 586 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 ZDHHC20Q5W0Z9 365 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 C22orf39Q6P5X5 142 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 Q6ZVU0 165 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 TMEM150AQ86TG1 271 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 VRK2Q86Y07 508 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 SLITRK4Q8IW52 837 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 ZNF454Q8N9F8 522 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 OR1S1Q8NH92 325 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 TMEM255BQ8WV15 326 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 OSTF1Q92882 214 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 ARMC5Q96C12 935 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 ENKD1Q9H0I2 346 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 HRASLSQ9HDD0 168 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 GLS2Q9UI32 602 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 ATPIF1Q9UII2 106 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 ZMIZ1Q9ULJ6 1067 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 CA5BQ9Y2D0 317 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 MYO10Q9HD67 2058 aa9.61□□□□□ -0.87
CLIP4-208ENST00000456385 FEZF1A0PJY2 475 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 PRR23D1E9PI22 279 aaPredicted RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 J3QLW9 94 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 PPM1DO15297 605 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 GALR3O60755 368 aaPredicted RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 PRR23D2P0DMB1 279 aaPredicted RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 ZNF19P17023 458 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 RAB3AP20336 220 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 PSMB1P20618 241 aaKnown RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 BSGP35613 385 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 IFNGR2P38484 337 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 GCGRP47871 477 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 CCR9P51686 369 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 SLC16A1P53985 500 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 EPHA4P54764 986 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 OR12D2P58182 307 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 PITPNAQ00169 270 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 DHODHQ02127 395 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 TRAM2Q15035 370 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 Q6ZNB5 142 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 ZNF620Q6ZNG0 422 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 LINGO2Q7L985 606 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 DNAJB7Q7Z6W7 309 aaPredicted RBP9.6□□□□□ -0.87
CLIP4-208ENST00000456385 PXKQ7Z7A4 578 aa9.6□□□□□ -0.87
CLIP4-208ENST00000456385 TPRA1Q86W33 373 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms