RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 DEFB107AQ8IZN7 70 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 CLEC4FQ8N1N0 589 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 C17orf47Q8NEP4 570 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 OR10Q1Q8NGQ4 319 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 SARAFQ96BY9 339 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 OMA1Q96E52 524 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 AURKBQ96GD4 344 aaPredicted RBP15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 LCORQ96JN0 433 aaPredicted RBP15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 GNRHR2Q96P88 292 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 NODALQ96S42 347 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 GPATCH1Q9BRR8 931 aaKnown RBP15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 FOLH1BQ9HBA9 442 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 SPAG4Q9NPE6 437 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 ADA2Q9NZK5 511 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 B4GALT7Q9UBV7 327 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 FAM215AQ9Y5M1 114 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 HCFC1P51610 2035 aa15.55■□□□□ 0.08
PRPF40A-204ENST00000450303 CREBBPQ92793 2442 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 ANKRD33BA6NCL7 494 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 H0Y3Z8 333 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 DNAJA2O60884 412 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 SLC6A2P23975 617 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 MASP1P48740 699 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 MTPNP58546 118 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 ACTR3P61158 418 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 PSPHP78330 225 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 SLC34A1Q06495 639 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 RGNQ15493 299 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 ATAD3BQ5T9A4 648 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 FNDC7Q5VTL7 733 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 C8orf82Q6P1X6 216 aaPredicted RBP15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 NEIL3Q8TAT5 605 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 PNPT1Q8TCS8 783 aaKnown RBP15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 MIPOL1Q8TD10 442 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 ASB5Q8WWX0 329 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 SLC9A6Q92581 669 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 HGDQ93099 445 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 GIMAP5Q96F15 307 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 STACQ99469 402 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 SLC39A3Q9BRY0 314 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 TTYH2Q9BSA4 534 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 LMF2Q9BU23 707 aaKnown RBP15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 SPATA9Q9BWV2 254 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 OR51I1Q9H343 314 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 METTL7AQ9H8H3 244 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 RYDENQ9NUL5 291 aaKnown RBP15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 EXD2Q9NVH0 621 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 GPATCH2Q9NW75 528 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 GIN1Q9NXP7 522 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 STX18Q9P2W9 335 aaKnown RBP15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 ABCA12Q86UK0 2595 aa15.54■□□□□ 0.08
PRPF40A-204ENST00000450303 ARHGAP21Q5T5U3 1957 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 FIGNL2A6NMB9 653 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 SNX4O95219 450 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 GLI4P10075 376 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 DRD5P21918 477 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 CHRNB4P30926 498 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 GCKP35557 465 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 VHLP40337 213 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 PPICP45877 212 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 SLC7A2P52569 658 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 GTF2A1P52655 376 aaPredicted RBP15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 DSTNP60981 165 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 RPP38P78345 283 aaKnown RBP15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 PLCXD2Q0VAA5 305 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 TOMM20Q15388 145 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 SPATS1Q496A3 300 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 B3GNT6Q6ZMB0 384 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 NUP54Q7Z3B4 507 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 SLC15A3Q8IY34 581 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 ZNF295-AS1Q8N0V1 137 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 LILRB4Q8NHJ6 448 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 FBXO27Q8NI29 283 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 HSPBAP1Q96EW2 488 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 OR7D2Q96RA2 312 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 SECISBP2Q96T21 854 aaKnown RBP15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 CDRT15Q96T59 188 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 YIPF4Q9BSR8 244 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 TRIM8Q9BZR9 551 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 PIGUQ9H490 435 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 Q9N2J8 555 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 ACKR4Q9NPB9 350 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 QPCTLQ9NXS2 382 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 SLC7A8Q9UHI5 535 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 MRTO4Q9UKD2 239 aaKnown RBP15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 LRBAP50851 2863 aa15.53■□□□□ 0.08
PRPF40A-204ENST00000450303 UGT2B11O75310 529 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 REM1O75628 298 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 KRT36O76013 467 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 AK1P00568 194 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 NAGAP17050 411 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 PTGER4P35408 488 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 EEFSECP57772 596 aaKnown RBP15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 GNA13Q14344 377 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 CYP51A1Q16850 503 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 RABL3Q5HYI8 236 aa15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 SAMD4BQ5PRF9 694 aaKnown RBP15.52■□□□□ 0.08
PRPF40A-204ENST00000450303 C1orf185Q5T7R7 199 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms