RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 PON3Q15166 354 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 KCNA10Q16322 511 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 ZNF791Q3KP31 576 aaPredicted RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 ARMC12Q5T9G4 340 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 CPTPQ5TA50 214 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 KIAA1161Q6NSJ0 714 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 ZNF852Q6ZMS4 543 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 MBOAT1Q6ZNC8 495 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 SSX9Q7RTT3 188 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 NAA40Q86UY6 237 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 DMRTC2Q8IXT2 367 aaPredicted RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 KLHL36Q8N4N3 616 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 HAVCR2Q8TDQ0 301 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 SMIM4Q8WVI0 70 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 FGF11Q92914 225 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 VOPP1Q96AW1 172 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 MAP3K3Q99759 626 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 GINS4Q9BRT9 223 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 PBX4Q9BYU1 374 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 AUNIPQ9H7T9 357 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 RNF122Q9H9V4 155 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 CACYBPQ9HB71 228 aaKnown RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 NOX3Q9HBY0 568 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 TAS2R5Q9NYW4 299 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 TREM2Q9NZC2 230 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 MRPL15Q9P015 296 aaKnown RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 ZNF282Q9UDV7 671 aaPredicted RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 CARHSP1Q9Y2V2 147 aaKnown RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 SMIM28A0A1B0GU29 152 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 MYBPHLA2RUH7 354 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 SNRPGP15A8MWD9 76 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 C1orf196B1AJZ1 125 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 E9PI62 339 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 NPIPB8E9PQR5 432 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 TGFBR3LH3BV60 316 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 ARIH2O95376 493 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 LY86O95711 162 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 MGMTP16455 207 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 ANXA7P20073 488 aaKnown RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 SHC1P29353 583 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 NOS3P29474 1203 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 ACTR1BP42025 376 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 MAPK9P45984 424 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 NPBWR1P48145 328 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 GIPRP48546 466 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 CCR8P51685 355 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 CCR9P51686 369 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 H2BFSP57053 126 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 BLOC1S1P78537 153 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 EFNB1P98172 346 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 OC90Q02509 493 aaPredicted RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 FABP9Q0Z7S8 132 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 TNFAIP1Q13829 316 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 ZNF235Q14590 738 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 ELFN2Q5R3F8 820 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 GPRC6AQ5T6X5 926 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 ACSM5Q6NUN0 579 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 FAM180BQ6P0A1 224 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 KLBQ86Z14 1044 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 MISPQ8IVT2 679 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 GPC2Q8N158 579 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 CHST14Q8NCH0 376 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 OR5M1Q8NGP8 315 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 ZNF296Q8WUU4 475 aaPredicted RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 THEM6Q8WUY1 208 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 SPRYD4Q8WW59 207 aaPredicted RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 SORCS1Q8WY21 1168 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 SPATA33Q96N06 139 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 TEFMQ96QE5 360 aaKnown RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 OR1F2PQ96R84 312 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 TRIB3Q96RU7 358 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 P2RY12Q9H244 342 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 LINC00597Q9H2U6 94 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 TMEM38AQ9H6F2 299 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 HRASLSQ9HDD0 168 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 PGPEP1Q9NXJ5 209 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 METTL1Q9UBP6 276 aaKnown RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 ZNF629Q9UEG4 869 aaPredicted RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 FBXL3Q9UKT7 428 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 ADAMTS5Q9UNA0 930 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 RLFQ13129 1914 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 KCNE1BA0A087WTH5 132 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 PGRMC2O15173 223 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 GPR39O43194 453 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 RNF13O43567 381 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 EIF4E2O60573 245 aaKnown RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 ZNF35P13682 527 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 LAG3P18627 525 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 LPOP22079 712 aaPredicted RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 ACHEP22303 614 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 IDSP22304 550 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 RPL3P39023 403 aaKnown RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 OPRD1P41143 372 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 CTSOP43234 321 aaPredicted RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 PRR5P85299 388 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 RING1Q06587 406 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 ALKBH1Q13686 389 aaKnown RBP8.05□□□□□ -1.12
LSM5-208ENST00000450169 KRT33BQ14525 404 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 PEA15Q15121 130 aa8.05□□□□□ -1.12
LSM5-208ENST00000450169 ZNF630Q2M218 657 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms