RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 BHLHE41Q9C0J9 482 aaPredicted RBP11.11□□□□□ -0.63
MSH5-209ENST00000450148 SERHL2Q9H4I8 314 aa11.11□□□□□ -0.63
MSH5-209ENST00000450148 PLEKHF2Q9H8W4 249 aa11.11□□□□□ -0.63
MSH5-209ENST00000450148 CCM2LQ9NUG4 571 aaPredicted RBP11.11□□□□□ -0.63
MSH5-209ENST00000450148 MED17Q9NVC6 651 aa11.11□□□□□ -0.63
MSH5-209ENST00000450148 HAO1Q9UJM8 370 aa11.11□□□□□ -0.63
MSH5-209ENST00000450148 FREM1Q5H8C1 2179 aa11.11□□□□□ -0.63
MSH5-209ENST00000450148 PRR14LQ5THK1 2151 aa11.11□□□□□ -0.63
MSH5-209ENST00000450148 CELSR1Q9NYQ6 3014 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 RAI1Q7Z5J4 1906 aaPredicted RBP11.1□□□□□ -0.63
MSH5-209ENST00000450148 A0A087WZY1 265 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 NPIPA5A0A0B4J1W7 369 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 NPIPA7E9PJI5 369 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 ANKRD28O15084 1053 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 BIRC5O15392 142 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 RGS16O15492 202 aaPredicted RBP11.1□□□□□ -0.63
MSH5-209ENST00000450148 OIP5O43482 229 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 SCN2BO60939 215 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 GOSR1O95249 250 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 HSPA4LO95757 839 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 HRGP04196 525 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 LINGO3P0C6S8 592 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 NPIPA8P0DM63 369 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 NID1P14543 1247 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 CD1EP15812 388 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 DDX5P17844 614 aaKnown RBP11.1□□□□□ -0.63
MSH5-209ENST00000450148 CCKARP32238 428 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 SLC6A8P48029 635 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 CPA2P48052 419 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 FAM27E3Q08E93 113 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 LSM12Q3MHD2 195 aaKnown RBP11.1□□□□□ -0.63
MSH5-209ENST00000450148 KLHL26Q53HC5 615 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.1□□□□□ -0.636e-7■■■■□ 21
MSH5-209ENST00000450148 CHMP1BQ7LBR1 199 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 P4HA3Q7Z4N8 544 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 MISPQ8IVT2 679 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 OR56A1Q8NGH5 318 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 SFXN5Q8TD22 340 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 SMPDL3BQ92485 455 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 JADE3Q92613 823 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 ZNF524Q96C55 264 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 PGM2Q96G03 612 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 DUSP26Q9BV47 211 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 ACTRT3Q9BYD9 372 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 AKTIPQ9H8T0 292 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 ATAD3AQ9NVI7 634 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 PLEKHA6Q9Y2H5 1048 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.1□□□□□ -0.63
MSH5-209ENST00000450148 RAP2CQ9Y3L5 183 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 SNX8Q9Y5X2 465 aa11.1□□□□□ -0.63
MSH5-209ENST00000450148 SH3D21A4FU49 640 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 ADAMDEC1O15204 470 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 TM9SF1O15321 606 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 SIAH2O43255 324 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 EFNA2O43921 213 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 CD8BP10966 210 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 IL11P20809 199 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 RPS3AP61247 264 aaKnown RBP11.09□□□□□ -0.63
MSH5-209ENST00000450148 RAC1P63000 192 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 SIRPAP78324 504 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 PHC1P78364 1004 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 ZNF117Q03924 483 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 TP53BP2Q13625 1128 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 PDCD2Q16342 344 aaPredicted RBP11.09□□□□□ -0.63
MSH5-209ENST00000450148 CEP85LQ5SZL2 805 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 DCST2Q5T1A1 773 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 OR4F3Q6IEY1 312 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 CBLN3Q6UW01 205 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 PAMR1Q6UXH9 720 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 CLECL1Q8IZS7 167 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 CNEP1R1Q8N9A8 125 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 OR5AK3PQ8NH89 298 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 ADAMTS15Q8TE58 950 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 ZBTB8AQ96BR9 441 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 ZBTB9Q96C00 473 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 SH3YL1Q96HL8 342 aaPredicted RBP11.09□□□□□ -0.63
MSH5-209ENST00000450148 PPP1R36Q96LQ0 422 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 RNF145Q96MT1 663 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 OR7D2Q96RA2 312 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 OPN3Q9H1Y3 402 aaPredicted RBP11.09□□□□□ -0.63
MSH5-209ENST00000450148 HHATLQ9HCP6 504 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 NEUROD4Q9HD90 331 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 NOP53Q9NZM5 478 aaKnown RBP11.09□□□□□ -0.63
MSH5-209ENST00000450148 ICAM5Q9UMF0 924 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 EIF3LQ9Y262 564 aaKnown RBP11.09□□□□□ -0.63
MSH5-209ENST00000450148 TESMINQ9Y4I5 508 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 ACTL7BQ9Y614 415 aa11.09□□□□□ -0.63
MSH5-209ENST00000450148 ZNF469Q96JG9 3925 aaPredicted RBP11.09□□□□□ -0.63
MSH5-209ENST00000450148 A0A0J9YW62 118 aa11.08□□□□□ -0.64
MSH5-209ENST00000450148 SCDO00767 359 aa11.08□□□□□ -0.64
MSH5-209ENST00000450148 EIF1AYO14602 144 aaKnown RBP11.08□□□□□ -0.64
MSH5-209ENST00000450148 SMNDC1O75940 238 aaKnown RBP eCLIP11.08□□□□□ -0.64
MSH5-209ENST00000450148 OPN1LWP04000 364 aa11.08□□□□□ -0.64
MSH5-209ENST00000450148 BGNP21810 368 aa11.08□□□□□ -0.64
MSH5-209ENST00000450148 SHC1P29353 583 aa11.08□□□□□ -0.64
MSH5-209ENST00000450148 CPOXP36551 454 aa11.08□□□□□ -0.64
MSH5-209ENST00000450148 CD79BP40259 229 aa11.08□□□□□ -0.64
MSH5-209ENST00000450148 SLC1A6P48664 564 aa11.08□□□□□ -0.64
MSH5-209ENST00000450148 RPL14P50914 215 aaKnown RBP11.08□□□□□ -0.64
MSH5-209ENST00000450148 MAD2L1Q13257 205 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms