RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TRMT5Q32P41 509 aaKnown RBP12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 COX20Q5RI15 118 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 NSUN5P2Q63ZY6 315 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 OR2L13Q8N349 312 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 ZNF615Q8N8J6 731 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 RELL2Q8NC24 303 aaPredicted RBP12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 NUP43Q8NFH3 380 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 TNIP2Q8NFZ5 429 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 ZFP90Q8TF47 636 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 ADIPOR1Q96A54 375 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 LRRC58Q96CX6 371 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 DOCK7Q96N67 2140 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 CGREF1Q99674 301 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 CPPED1Q9BRF8 314 aaPredicted RBP12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 PRDM14Q9GZV8 571 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 OR10A5Q9H207 317 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 UBQLN3Q9H347 655 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 CALHM2Q9HA72 323 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 NEUROD4Q9HD90 331 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 GMPR2Q9P2T1 348 aaKnown RBP12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 C19orf53Q9UNZ5 99 aaPredicted RBP12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 CFL2Q9Y281 166 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 MED12Q93074 2177 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 A0A087WV62 115 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 PLOD3O60568 738 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 ERN1O75460 977 aaKnown RBP12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 GOSR1O95249 250 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 IL18BPO95998 194 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 ZCCHC18P0CG32 403 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 EPXP11678 715 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 OPRM1P35372 400 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 CHI3L1P36222 383 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 CASP3P42574 277 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 EMDP50402 254 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 FBXW4P57775 412 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 MTPNP58546 118 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 SLC25A3Q00325 362 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 ZNF155Q12901 538 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 BNIP1Q12981 228 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 LASP1Q14847 261 aaKnown RBP12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 NNATQ16517 81 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 RABL3Q5HYI8 236 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 COQ5Q5HYK3 327 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 SAXO2Q658L1 398 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 TIGD3Q6B0B8 471 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 ANGPTL8Q6UXH0 198 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 TMEM64Q6YI46 380 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 C6orf120Q7Z4R8 191 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 RNF130Q86XS8 419 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 CDC20BQ86Y33 519 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 SFXN5Q8TD22 340 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 ABTB1Q969K4 478 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 MBD6Q96DN6 1003 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 GIMAP5Q96F15 307 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 TMEM41AQ96HV5 264 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 GNRHR2Q96P88 292 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 ALPK1Q96QP1 1244 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 ITPAQ9BY32 194 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 EFCAB1Q9HAE3 211 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 FOLH1BQ9HBA9 442 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 C3orf14Q9HBI5 128 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 GPATCH2Q9NW75 528 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 PACSIN3Q9UKS6 424 aa12.5□□□□□ -0.41
PDLIM2-213ENST00000448520 ZNF469Q96JG9 3925 aaPredicted RBP12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 TUBAL3A6NHL2 446 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 B2RBV5 119 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 CLIC1O00299 241 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 PSMG1O95456 288 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 ACTL6AO96019 429 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 HMGN2P05204 90 aaKnown RBP12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 ACP2P11117 423 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 FOSL1P15407 271 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 BMP7P18075 431 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 KLK2P20151 261 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 CALB2P22676 271 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 CTSSP25774 331 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 GCKP35557 465 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 MVDP53602 400 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 CORO7P57737 925 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 MXRA7P84157 204 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 LRRC74AQ0VAA2 488 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 SNTB1Q13884 538 aaKnown RBP12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 TOMM20Q15388 145 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 RUNDC3AQ59EK9 446 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.49□□□□□ -0.413e-8■■■■■ 44.2
PDLIM2-213ENST00000448520 FNDC7Q5VTL7 733 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 MFSD12Q6NUT3 480 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 TNFAIP8L2Q6P589 184 aaPredicted RBP12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 TMEM81Q6P7N7 255 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 POMZP3Q6PJE2 187 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 NUP54Q7Z3B4 507 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 PCYOX1LQ8NBM8 494 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 NAXEQ8NCW5 288 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 RBM15BQ8NDT2 890 aaKnown RBP12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 OR56A1Q8NGH5 318 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 OR5D16Q8NGK9 328 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 OR1J4Q8NGS1 313 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 ZPLD1Q8TCW7 415 aa12.49□□□□□ -0.41
PDLIM2-213ENST00000448520 RAB8BQ92930 207 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms