RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 ULBP3Q9BZM4 244 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 PITHD1Q9GZP4 211 aaPredicted RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 HCN3Q9P1Z3 774 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 DHCR7Q9UBM7 475 aaKnown RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 UBQLN2Q9UHD9 624 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 ZNF639Q9UID6 485 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 ADAM30Q9UKF2 790 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 SRPK3Q9UPE1 567 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 ENTPD4Q9Y227 616 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 YARS2Q9Y2Z4 477 aaKnown RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 CMAHPQ9Y471 501 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 LRRK1Q38SD2 2015 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 TP53BP1Q12888 1972 aaPredicted RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 LOC105369274A0A096LPK9 316 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 IGHV5-10-1A0A0J9YXX1 117 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 ASPDHA6ND91 283 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 ZNF98A6NK75 572 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 LINC01387J3KSC0 135 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 SIGLEC5O15389 551 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 SSNA1O43805 119 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 LCMT2O60294 686 aaKnown RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 OR10H2O60403 315 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 EEDO75530 441 aaKnown RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 TNFSF15O95150 251 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 IFNA14P01570 189 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 ZNF888P0CJ79 500 aaPredicted RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 CEACAM1P13688 526 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 FBLP22087 321 aaKnown RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 ACP1P24666 158 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 SOAT1P35610 550 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 RPS19P39019 145 aaKnown RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 ATP4BP51164 291 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 CTAG1AP78358 180 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 RCAN2Q14206 197 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 FCN2Q15485 313 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 TMEM35AQ53FP2 167 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 OR2T5Q6IEZ7 315 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 OR4N4Q8N0Y3 316 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 L3MBTL4Q8NA19 623 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 OR2T29Q8NH02 315 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 OR8K5Q8NH50 307 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 RBPMSQ93062 196 aaKnown RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 KIAA1143Q96AT1 154 aaPredicted RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 DMRT3Q9NQL9 472 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 CUTCQ9NTM9 273 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 HPF1Q9NWY4 346 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 TMEFF2Q9UIK5 374 aaPredicted RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 GPR45Q9Y5Y3 372 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 ARID1BQ8NFD5 2236 aaPredicted RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 PCNX2A6NKB5 2137 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 A0A1B0GVC2 190 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 A0A1W2PPV9 198 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 FAM234BA2RU67 622 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 A6NIN4 97 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 CPSF4O95639 269 aaKnown RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 PAHP00439 452 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 GIMD1P0DJR0 217 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 FOLR1P15328 257 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 CSRP1P21291 193 aaKnown RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 PSMA1P25786 263 aaKnown RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 PEBP1P30086 187 aaKnown RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 CSF2RBP32927 897 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 OR1D4P47884 311 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 CASP9P55211 416 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 NPRL3Q12980 569 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 FADDQ13158 208 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 ZNF658BQ4V348 819 aaPredicted RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 SPIN4Q56A73 249 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 FAM209BQ5JX69 171 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 IRAK1BP1Q5VVH5 260 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 FRMPD2BQ6IN97 320 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 CCDC190Q86UF4 302 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 PAQR7Q86WK9 346 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 Q8N402 240 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 GDPD1Q8N9F7 314 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 BEST4Q8NFU0 473 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 SETD6Q8TBK2 473 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 EXOSC8Q96B26 276 aaKnown RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 C1GALT1C1Q96EU7 318 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 LINC00052Q96N35 136 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 OR52E6Q96RD3 313 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 DCLRE1CQ96SD1 692 aaKnown RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 SPNS1Q9H2V7 528 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 FAM60AQ9NP50 221 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 MS4A12Q9NXJ0 267 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 COPZ2Q9P299 210 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 CLEC4AQ9UMR7 237 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 DIMT1Q9UNQ2 313 aaKnown RBP5.55□□□□□ -1.52
PROM1-201ENST00000447510 COPS3Q9UNS2 423 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 PCDHGA1Q9Y5H4 931 aa5.55□□□□□ -1.52
PROM1-201ENST00000447510 MN1Q10571 1320 aaPredicted RBP5.54□□□□□ -1.52
PROM1-201ENST00000447510 H0YIV9 168 aa5.54□□□□□ -1.52
PROM1-201ENST00000447510 SGK494L7N484 410 aa5.54□□□□□ -1.52
PROM1-201ENST00000447510 SLC30A4O14863 429 aa5.54□□□□□ -1.52
PROM1-201ENST00000447510 ZNF749O43361 778 aa5.54□□□□□ -1.52
PROM1-201ENST00000447510 CTSVO60911 334 aa5.54□□□□□ -1.52
PROM1-201ENST00000447510 RDH16O75452 317 aa5.54□□□□□ -1.52
PROM1-201ENST00000447510 CDC123O75794 336 aaPredicted RBP5.54□□□□□ -1.52
PROM1-201ENST00000447510 KCNK5O95279 499 aa5.54□□□□□ -1.52
PROM1-201ENST00000447510 HSD3B1P14060 373 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms