RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 MAPK14Q16539 360 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ALG11Q2TAA5 492 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 MEPCEQ7L2J0 689 aaKnown RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 COMMD6Q7Z4G1 85 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 OR14A2Q96R54 314 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 LMF1Q96S06 567 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 PRRT1Q99946 306 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 GCGRP47871 477 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 PRSS42Q7Z5A4 293 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ZNF561Q8N587 486 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 OR6S1Q8NH40 331 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 MAN2C1Q9NTJ4 1040 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 SAGE1Q9NXZ1 904 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 UGDHO60701 494 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 DNAJB6O75190 326 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 SLC25A12O75746 678 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 LATS1O95835 1130 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 AMD1P17707 334 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 G0S2P27469 103 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 CRYBB2P43320 205 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 SLC16A9Q7RTY1 509 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 COX18Q8N8Q8 333 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 SLC30A7Q8NEW0 376 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 SCGB1C1Q8TD33 95 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 MARVELD3Q96A59 401 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 CACNG4Q9UBN1 327 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 GRM6O15303 877 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 TSPAN6O43657 245 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ATG12O94817 140 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 PPT1P50897 306 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 AFF3P51826 1226 aaKnown RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 RPE65Q16518 533 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 NLGN4XQ8N0W4 816 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 CELF5Q8N6W0 485 aaKnown RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 FAM46BQ96A09 425 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 LINC00052Q96N35 136 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 NCDNQ9UBB6 729 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 PUS1Q9Y606 427 aaKnown RBP eCLIP7.43□□□□□ -1.22
SMG1-202ENST00000446231 SBK2P0C263 348 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 LRRC56Q8IYG6 542 aaPredicted RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 CPA6Q8N4T0 437 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 RHNO1Q9BSD3 238 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 POLDIP3Q9BY77 421 aaKnown RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 ACER3Q9NUN7 267 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ZNF226Q9NYT6 803 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 LY86O95711 162 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 POU3F3P20264 500 aaPredicted RBP7.42□□□□□ -1.22
SMG1-202ENST00000446231 PXKQ7Z7A4 578 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 NRMQ8IXM6 262 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 OR9A1PQ8NGU1 263 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 NME7Q9Y5B8 376 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 ACACAQ13085 2346 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 DUSP28Q4G0W2 176 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 ARHGAP11AQ6P4F7 1023 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 UQCC3Q6UW78 93 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 FCRLAQ7L513 359 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 NEUROD4Q9HD90 331 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 IL20Q9NYY1 176 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 ZNF281Q9Y2X9 895 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 NPFFR2Q9Y5X5 522 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 RAB4BP61018 213 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 RNF151Q2KHN1 245 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 PRAMEF14Q5SWL7 426 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 GPAT4Q86UL3 456 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 OR4E2Q8NGC2 313 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 ELOVL2Q9NXB9 296 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 IL20RAQ9UHF4 553 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 BACE2Q9Y5Z0 518 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 M0R082 166 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 OR4Q2P0C623 313 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 NKG7Q16617 165 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 CTSL3PQ5NE16 218 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 MLIPQ5VWP3 458 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 VASNQ6EMK4 673 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 OR52H1Q8NGJ2 320 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 AKR7LQ8NHP1 331 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 OR8D1Q8WZ84 308 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 PTPN18Q99952 460 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 ZNF251Q9BRH9 671 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 DHDHQ9UQ10 334 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 SLIT2O94813 1529 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 DUXAA6NLW8 204 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 AGAP14A8MT82 685 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 TXNDC12O95881 172 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 HAPLN1P10915 354 aaPredicted RBP7.42□□□□□ -1.22
SMG1-202ENST00000446231 HLXQ14774 488 aaPredicted RBP7.42□□□□□ -1.22
SMG1-202ENST00000446231 TMIGD1Q6UXZ0 262 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 TMEM145Q8NBT3 493 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 WDR45Q9Y484 360 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 MPDZO75970 2070 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 SYT14P1Q58G82 188 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 DNAAF1Q8NEP3 725 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 TMEM19Q96HH6 336 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 SUV39H2Q9H5I1 410 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 H7C417 338 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 KCNJ13O60928 360 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 GPR32O75388 356 aa7.42□□□□□ -1.22
SMG1-202ENST00000446231 RNASE10Q5GAN6 216 aaKnown RBP7.42□□□□□ -1.22
SMG1-202ENST00000446231 RIMS1Q86UR5 1692 aaKnown RBP7.42□□□□□ -1.22
SMG1-202ENST00000446231 CDH26Q8IXH8 852 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms