RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 MMP15P51511 669 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 PSMA6P60900 246 aaKnown RBP13.02□□□□□ -0.32
VPS52-212ENST00000445902 LDLRAD1Q5T700 205 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 CXXC5Q7LFL8 322 aaKnown RBP13.02□□□□□ -0.32
VPS52-212ENST00000445902 SLITRK4Q8IW52 837 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 NRMQ8IXM6 262 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 MEIOBQ8N635 442 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 RELL2Q8NC24 303 aaPredicted RBP13.02□□□□□ -0.32
VPS52-212ENST00000445902 OR52B4Q8NGK2 314 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 ABHD4Q8TB40 342 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 EFCAB11Q9BUY7 163 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 ARL6Q9H0F7 186 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 SLC35C2Q9NQQ7 365 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 ZCCHC3Q9NUD5 404 aaKnown RBP13.02□□□□□ -0.32
VPS52-212ENST00000445902 MARK1Q9P0L2 795 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 ICKQ9UPZ9 632 aa13.02□□□□□ -0.32
VPS52-212ENST00000445902 EXOGQ9Y2C4 368 aaKnown RBP13.02□□□□□ -0.32
VPS52-212ENST00000445902 FXYD6-FXYD2A0A087WZ82 144 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 ZNF98A6NK75 572 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 KCNJ13O60928 360 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 RAB3BP20337 219 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 CBX5P45973 191 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 MAPK8P45983 427 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 SLC11A1P49279 550 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 RNF144AP50876 292 aaPredicted RBP13.02□□□□□ -0.33
VPS52-212ENST00000445902 ACSM1Q08AH1 577 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 FCRLBQ6BAA4 426 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 SLC9B2Q86UD5 537 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 RASGRP3Q8IV61 690 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 FBXO22Q8NEZ5 403 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 SLC5A11Q8WWX8 675 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 SORCS1Q8WY21 1168 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 KCTD12Q96CX2 325 aaKnown RBP13.02□□□□□ -0.33
VPS52-212ENST00000445902 ORAI1Q96D31 301 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 FXYD6Q9H0Q3 95 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 TRIM36Q9NQ86 728 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 MCRIP1C9JLW8 97 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 DNASE2O00115 360 aaPredicted RBP13.02□□□□□ -0.33
VPS52-212ENST00000445902 INPPL1O15357 1258 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 GAAP10253 952 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 F8A1P23610 371 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 TRHRP34981 398 aaPredicted RBP13.02□□□□□ -0.33
VPS52-212ENST00000445902 UBE2MP61081 183 aaKnown RBP13.02□□□□□ -0.33
VPS52-212ENST00000445902 SNRPD1P62314 119 aaKnown RBP13.02□□□□□ -0.33
VPS52-212ENST00000445902 LASP1Q14847 261 aaKnown RBP13.02□□□□□ -0.33
VPS52-212ENST00000445902 PGGHGQ32M88 737 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 SLC24A5Q71RS6 500 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 MRGPREQ86SM8 312 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 PAQR7Q86WK9 346 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 VRK2Q86Y07 508 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 AUTS2Q8WXX7 1259 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 UPF1Q92900 1129 aaKnown RBP eCLIP13.02□□□□□ -0.33
VPS52-212ENST00000445902 TM4SF18Q96CE8 201 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 SCPEP1Q9HB40 452 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 KCNE3Q9Y6H6 103 aa13.02□□□□□ -0.33
VPS52-212ENST00000445902 HYAL3O43820 417 aaPredicted RBP13.01□□□□□ -0.33
VPS52-212ENST00000445902 SPDEFO95238 335 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 C1orf105O95561 183 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 FGF2P09038 288 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 AKR1A1P14550 325 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 RAB3AP20336 220 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 GCGRP47871 477 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 OMPP47874 163 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 EIF2B5Q13144 721 aaKnown RBP13.01□□□□□ -0.33
VPS52-212ENST00000445902 SLC22A10Q63ZE4 541 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 TXNDC8Q6A555 127 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 TMEM220Q6QAJ8 160 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 NXPE4Q6UWF7 544 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 CFAP206Q8IYR0 622 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 ZNF671Q8TAW3 534 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 ATOH1Q92858 354 aaPredicted RBP13.01□□□□□ -0.33
VPS52-212ENST00000445902 EVA1AQ9H8M9 152 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 PRELID3BQ9Y3B1 194 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 AK6Q9Y3D8 172 aaKnown RBP13.01□□□□□ -0.33
VPS52-212ENST00000445902 NUP210Q8TEM1 1887 aaPredicted RBP13.01□□□□□ -0.33
VPS52-212ENST00000445902 TUBAL3A6NHL2 446 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 RP2O75695 350 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 FUT5Q11128 374 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 ACSM3Q53FZ2 586 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 ZNF613Q6PF04 617 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 APOOLQ6UXV4 268 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 Q6ZVU0 165 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 AMER3Q8N944 861 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 ANKRD53Q8N9V6 530 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 BOLLQ8N9W6 283 aaKnown RBP13.01□□□□□ -0.33
VPS52-212ENST00000445902 CLRN3Q8NCR9 226 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 PIGXQ8TBF5 258 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 TMEM255BQ8WV15 326 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 ASB12Q8WXK4 309 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 ZNF707Q96C28 371 aaPredicted RBP13.01□□□□□ -0.33
VPS52-212ENST00000445902 C4orf36Q96KX1 117 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 OR1F2PQ96R84 312 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 SPATA5L1Q9BVQ7 753 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 ACTR6Q9GZN1 396 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 SLC6A17Q9H1V8 727 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 OR51V1Q9H2C8 321 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 SLC6A15Q9H2J7 730 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 ELAC1Q9H777 363 aaKnown RBP13.01□□□□□ -0.33
VPS52-212ENST00000445902 HRASLSQ9HDD0 168 aa13.01□□□□□ -0.33
VPS52-212ENST00000445902 EQTNQ9NQ60 294 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms