RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 NCOR1O75376 2440 aa17.45■□□□□ 0.38
SEMA3D-202ENST00000444867 ARID1BQ8NFD5 2236 aaPredicted RBP17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 A0A1B0GX78 115 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 SNTNA6NMZ2 147 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 A8MU76 341 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 PRKYO43930 277 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 ANKRD34CP0C6C1 535 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 ADORA3P0DMS8 318 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 MYF5P13349 255 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 SIGLEC14Q08ET2 396 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 SNAPC1Q16533 368 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 TIGD6Q17RP2 521 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 PEAR1Q5VY43 1037 aaPredicted RBP17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 ZC3H14Q6PJT7 736 aaKnown RBP17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 ZNF550Q7Z398 422 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 FAM181AQ8N9Y4 354 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 OR4N2Q8NGD1 307 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 WDR36Q8NI36 951 aaKnown RBP17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 TMEM163Q8TC26 289 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 TMEM239Q8WW34 195 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 CNOT9Q92600 299 aaKnown RBP17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 EDAQ92838 391 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 SLC46A1Q96NT5 459 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 NUDT22Q9BRQ3 303 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 PLA2G12AQ9BZM1 189 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 DNAJC27Q9NZQ0 273 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 ZNF223Q9UK11 482 aaPredicted RBP17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 SRPK3Q9UPE1 567 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 OR10H1Q9Y4A9 318 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 CDH10Q9Y6N8 788 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 UNC13CQ8NB66 2214 aa17.44■□□□□ 0.38
SEMA3D-202ENST00000444867 IRGMA1A4Y4 181 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 OR2W5A6NFC9 320 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 TLX2O43763 284 aaPredicted RBP17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 CD36P16671 472 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 TGFBR2P37173 567 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 RFX3P48380 749 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 PLAURQ03405 335 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 PRKCDQ05655 676 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 TMEM44Q2T9K0 475 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 ZNF620Q6ZNG0 422 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 TMEM151BQ8IW70 566 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 CYP4Z2PQ8N1L4 340 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 BCORP1Q8N888 145 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 OR8D4Q8NGM9 314 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 PTPMT1Q8WUK0 201 aaPredicted RBP17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 FGF11Q92914 225 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 TMEM80Q96HE8 168 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 RACGAP1Q9H0H5 632 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 DSN1Q9H410 356 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 FGF21Q9NSA1 209 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 TBC1D23Q9NUY8 699 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 MED17Q9NVC6 651 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 DNAJB12Q9NXW2 375 aaKnown RBP17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 DHCR7Q9UBM7 475 aaKnown RBP17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 PI4KAP42356 2102 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 M0R082 166 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 CHP2O43745 196 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 PIP5K1CO60331 668 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 PDGFBP01127 241 aaPredicted RBP17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 DBTP11182 482 aaKnown RBP17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 CDK4P11802 303 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 ZNF182P17025 639 aaPredicted RBP17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 GPR4P46093 362 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 ACY1Q03154 408 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 ZNF91Q05481 1191 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 AQP6Q13520 282 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 ELAVL1Q15717 326 aaKnown RBP17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 SYT14P1Q58G82 188 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 GATAD2AQ86YP4 633 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 ZNF614Q8N883 585 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 SENP5Q96HI0 755 aaPredicted RBP17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 ART5Q96L15 291 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 DPYSL5Q9BPU6 564 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 TSSK6Q9BXA6 273 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 HOXD1Q9GZZ0 328 aa17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 MKKSQ9NPJ1 570 aaPredicted RBP17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 PNO1Q9NRX1 252 aaKnown RBP17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.43■□□□□ 0.38
SEMA3D-202ENST00000444867 A0A0B4J2E0 115 aa17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 A0A1B0GX12 115 aa17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 TCRBV16S1A1N1A0A5B0 115 aa17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 TMX2-CTNND1H3BSU7 103 aa17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 POLR1CO15160 346 aaPredicted RBP17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 CSTF2P33240 577 aaKnown RBP eCLIP17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 RORAP35398 523 aa17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 RBM34P42696 430 aaKnown RBP17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 PPICP45877 212 aa17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 SLC37A1P57057 533 aa17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 RHAGQ02094 409 aa17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 SPCS2Q15005 226 aa17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 HLA-BQ31612 363 aa17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 ARHGAP40Q5TG30 622 aa17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 RPL13AP3Q6NVV1 102 aa17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 MEX3DQ86XN8 651 aaKnown RBP17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 CDK20Q8IZL9 346 aa17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 LSMEM1Q8N8F7 131 aa17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 BRIX1Q8TDN6 353 aaKnown RBP17.42■□□□□ 0.38
SEMA3D-202ENST00000444867 PIGKQ92643 395 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms