RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 GKN3PP0CG01 181 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 ADORA3P0DMS8 318 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 FOLR1P15328 257 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 HTR2AP28223 471 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 HOXD12P35452 270 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 OR1D4P47884 311 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 ELAVL1Q15717 326 aaKnown RBP14.5□□□□□ -0.09
SNX13-204ENST00000444712 PLK5Q496M5 336 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 PRPF38BQ5VTL8 546 aaKnown RBP14.5□□□□□ -0.09
SNX13-204ENST00000444712 ZNF440Q8IYI8 595 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 IQCF1Q8N6M8 205 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 SAP25Q8TEE9 199 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 NAT6Q93015 286 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 TMEM80Q96HE8 168 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 PRSS27Q9BQR3 290 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 EGLN3Q9H6Z9 239 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 MKKSQ9NPJ1 570 aaPredicted RBP14.5□□□□□ -0.09
SNX13-204ENST00000444712 DNAJC27Q9NZQ0 273 aa14.5□□□□□ -0.09
SNX13-204ENST00000444712 A8MU76 341 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 NPIPB9F8W1W9 429 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 TLX2O43763 284 aaPredicted RBP14.49□□□□□ -0.09
SNX13-204ENST00000444712 MAN1A2O60476 641 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 HMGN1P05114 100 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 DBTP11182 482 aaKnown RBP14.49□□□□□ -0.09
SNX13-204ENST00000444712 CD36P16671 472 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 RORAP35398 523 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 RBM34P42696 430 aaKnown RBP14.49□□□□□ -0.09
SNX13-204ENST00000444712 LSM11P83369 360 aaKnown RBP eCLIP14.49□□□□□ -0.097e-19■■■■■ 81
SNX13-204ENST00000444712 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.49□□□□□ -0.09
SNX13-204ENST00000444712 SRSF5Q13243 272 aaKnown RBP14.49□□□□□ -0.09
SNX13-204ENST00000444712 KLHL22Q53GT1 634 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 ARHGAP40Q5TG30 622 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 PEAR1Q5VY43 1037 aaPredicted RBP14.49□□□□□ -0.09
SNX13-204ENST00000444712 ACSM5Q6NUN0 579 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 ZNF620Q6ZNG0 422 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 ZAR1Q86SH2 424 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 SLITRK4Q8IW52 837 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 TMEM151BQ8IW70 566 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 LSMEM1Q8N8F7 131 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 POGLUT1Q8NBL1 392 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 TSSK6Q9BXA6 273 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 PNO1Q9NRX1 252 aaKnown RBP14.49□□□□□ -0.09
SNX13-204ENST00000444712 DNAJB12Q9NXW2 375 aaKnown RBP14.49□□□□□ -0.09
SNX13-204ENST00000444712 SELENONQ9NZV5 590 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 DHCR7Q9UBM7 475 aaKnown RBP14.49□□□□□ -0.09
SNX13-204ENST00000444712 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.49□□□□□ -0.09
SNX13-204ENST00000444712 SLC35A3Q9Y2D2 325 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 DTX4Q9Y2E6 619 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 MED31Q9Y3C7 131 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 CLCA3PQ9Y6N3 262 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 UNC13CQ8NB66 2214 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 PRKYO43930 277 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 IGKV1D-16P01601 117 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 PRG2P13727 222 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 LCN1P31025 176 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 CSTF2P33240 577 aaKnown RBP eCLIP14.49□□□□□ -0.09
SNX13-204ENST00000444712 PI4KAP42356 2102 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 PPICP45877 212 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 GPR4P46093 362 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 DCAF7P61962 342 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 EFNB1P98172 346 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 ZNF91Q05481 1191 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 PRKCDQ05655 676 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 MINDY4Q4G0A6 757 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 ZC3H14Q6PJT7 736 aaKnown RBP14.49□□□□□ -0.09
SNX13-204ENST00000444712 BCORP1Q8N888 145 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 ZNF527Q8NB42 609 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 OR4N2Q8NGD1 307 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 PIGKQ92643 395 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 SENP5Q96HI0 755 aaPredicted RBP14.49□□□□□ -0.09
SNX13-204ENST00000444712 PLEKHA8Q96JA3 519 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 NUDT22Q9BRQ3 303 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 PLA2G12AQ9BZM1 189 aa14.49□□□□□ -0.09
SNX13-204ENST00000444712 A0A0B4J2E0 115 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 A0A1B0GX12 115 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 TCRBV16S1A1N1A0A5B0 115 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 UNC119BA6NIH7 251 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 EFCAB7A8K855 629 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 PRODHO43272 600 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 CLPSP04118 112 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 ZNF182P17025 639 aaPredicted RBP14.48□□□□□ -0.09
SNX13-204ENST00000444712 RHAGQ02094 409 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 HLA-BQ31612 363 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 SYT14P1Q58G82 188 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 GATAD2AQ86YP4 633 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 SLC43A2Q8N370 569 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 OR2T33Q8NG76 320 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 OR4D9Q8NGE8 314 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 OR52L1Q8NGH7 329 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 OR14A16Q8NHC5 309 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 CEP76Q8TAP6 659 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 RNF217Q8TC41 542 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 BRIX1Q8TDN6 353 aaKnown RBP14.48□□□□□ -0.09
SNX13-204ENST00000444712 PTPMT1Q8WUK0 201 aaPredicted RBP14.48□□□□□ -0.09
SNX13-204ENST00000444712 CNOT9Q92600 299 aaKnown RBP14.48□□□□□ -0.09
SNX13-204ENST00000444712 DAZLQ92904 295 aaKnown RBP14.48□□□□□ -0.09
SNX13-204ENST00000444712 RFKQ969G6 155 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 LRR1Q96L50 414 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 SLC7A5P2Q9GIP4 190 aa14.48□□□□□ -0.09
SNX13-204ENST00000444712 DSN1Q9H410 356 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms