RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 PCYT1AP49585 367 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 TMBIM6P55061 237 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 OCLNQ16625 522 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 ULK3Q6PHR2 472 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 ZER1Q7Z7L7 766 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 MISPQ8IVT2 679 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 CADM2Q8N3J6 435 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 RAB2BQ8WUD1 216 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 PTPMT1Q8WUK0 201 aaPredicted RBP5.57□□□□□ -1.52
VPS50-205ENST00000441602 CNOT9Q92600 299 aaKnown RBP5.57□□□□□ -1.52
VPS50-205ENST00000441602 VMP1Q96GC9 406 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 CRB3Q9BUF7 120 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 TSSK6Q9BXA6 273 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 TBL1XR1Q9BZK7 514 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 VN1R1Q9GZP7 353 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 ARRDC1-AS1Q9H2J1 176 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 TVP23BQ9NYZ1 205 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 ERVK-18Q9QC07 812 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 PSORS1C1Q9UIG5 152 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 PCDHGB1Q9Y5G3 927 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 LY6G6EA0A0G2JKS1 128 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 EFCAB9A8MZ26 197 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 PATE3B3GLJ2 98 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 H3BMH7 237 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 PEX12O00623 359 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 TO15178 435 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 XPNPEP2O43895 674 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 EIF4E2O60573 245 aaKnown RBP5.57□□□□□ -1.52
VPS50-205ENST00000441602 UTS2O95399 124 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 SOX14O95416 240 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 EPPINO95925 133 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 ONECUT2O95948 504 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 IFNGP01579 166 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 MT-ND2P03891 347 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 ZGLP1P0C6A0 271 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 UBL4AP11441 157 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 PIPP12273 146 aaPredicted RBP5.57□□□□□ -1.52
VPS50-205ENST00000441602 GIPRP48546 466 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 TMED10P49755 219 aaKnown RBP5.57□□□□□ -1.52
VPS50-205ENST00000441602 SLC37A1P57057 533 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 SLC35A2P78381 396 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 DYNC1I2Q13409 638 aaKnown RBP5.57□□□□□ -1.52
VPS50-205ENST00000441602 C1DQ13901 141 aaKnown RBP5.57□□□□□ -1.52
VPS50-205ENST00000441602 RAB39AQ14964 217 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 LPAL2Q16609 132 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 TMEM201Q5SNT2 666 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 NPSR1Q6W5P4 371 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 NRMQ8IXM6 262 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 C17orf47Q8NEP4 570 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 OR1N1Q8NGS0 311 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 PHOSPHO1Q8TCT1 267 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 MUL1Q969V5 352 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 TP53INP1Q96A56 240 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 NMD3Q96D46 503 aaKnown RBP5.57□□□□□ -1.52
VPS50-205ENST00000441602 CDC6Q99741 560 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 NUDT9Q9BW91 350 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 EXOSC3Q9NQT5 275 aaKnown RBP5.57□□□□□ -1.52
VPS50-205ENST00000441602 FSCN3Q9NQT6 498 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 MAN2C1Q9NTJ4 1040 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 REV1Q9UBZ9 1251 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 U3KQA8 63 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 A0A1B0GWA3 101 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 SAGE2PA6NJ88 616 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ELOA3DA6NLF2 546 aaPredicted RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 B4E171 279 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 FAM47E-STBD1D6RA91 191 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 E9PQ18 207 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 AHCYL1O43865 530 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 OR6B1O95007 311 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ZIC2O95409 532 aaPredicted RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 CDK1P06493 297 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 SLC5A2P31639 672 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 SLC6A6P31641 620 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 GRK5P34947 590 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ADH7P40394 386 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 TSPAN7P41732 249 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 CCR4P51679 360 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ZNF136P52737 540 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 PNLIPRP2P54317 469 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 RAB15P59190 212 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 MC2RQ01718 297 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 TBCEQ15813 527 aaPredicted RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 MAPK14Q16539 360 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ELOA3BQ3SY89 546 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 TIMM50Q3ZCQ8 353 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 VWA2Q5GFL6 755 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ALG10BQ5I7T1 473 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 GPR107Q5VW38 600 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 WBP2NLQ6ICG8 309 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 HSDL2Q6YN16 418 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ZNF367Q7RTV3 350 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ERI1Q8IV48 349 aaKnown RBP5.56□□□□□ -1.52
VPS50-205ENST00000441602 ELOA3Q8NG57 546 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 OR2T33Q8NG76 320 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 FANK1Q8TC84 345 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 SLC22A8Q8TCC7 542 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 MR1Q95460 341 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 ZG16BQ96DA0 208 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 SGTBQ96EQ0 304 aa5.56□□□□□ -1.52
VPS50-205ENST00000441602 FAM46AQ96IP4 442 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms