RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 PPP2R1BP30154 601 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 HTR1FP30939 366 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 GRM7Q14831 915 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 ZNF697Q5TEC3 545 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 CFAP206Q8IYR0 622 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 OR10Z1Q8NGY1 313 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 HMGB4Q8WW32 186 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 KCTD12Q96CX2 325 aaKnown RBP18.93■□□□□ 0.62
SHOX2-203ENST00000441443 SLC35G5Q96KT7 338 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 OR10A4Q9H209 315 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 RPS6KB2Q9UBS0 482 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 GPR55Q9Y2T6 319 aaPredicted RBP18.93■□□□□ 0.62
SHOX2-203ENST00000441443 HRH3Q9Y5N1 445 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 HNRNPCL2B2RXH8 293 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 GMDSO60547 372 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 LPLP06858 475 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 ACVR1BP36896 505 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 RPTNQ6XPR3 784 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 OR13C5Q8NGS8 318 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 OR5W2Q8NH69 310 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 FIBINQ8TAL6 211 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 SMAP2Q8WU79 429 aaPredicted RBP18.93■□□□□ 0.62
SHOX2-203ENST00000441443 TIMP4Q99727 224 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 IFT46Q9NQC8 304 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 PLAGL1Q9UM63 463 aa18.93■□□□□ 0.62
SHOX2-203ENST00000441443 VEGFCP49767 419 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 RGS7BPQ6MZT1 257 aaPredicted RBP18.92■□□□□ 0.62
SHOX2-203ENST00000441443 PLBD1Q6P4A8 553 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 LRFN4Q6PJG9 635 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 NKAIN4Q8IVV8 208 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 UXS1Q8NBZ7 420 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 ZG16BQ96DA0 208 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 WDR34Q96EX3 536 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 FAIM2Q9BWQ8 316 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 ZCCHC3Q9NUD5 404 aaKnown RBP18.92■□□□□ 0.62
SHOX2-203ENST00000441443 TEX10Q9NXF1 929 aaPredicted RBP18.92■□□□□ 0.62
SHOX2-203ENST00000441443 BAIAP2Q9UQB8 552 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 NPTNQ9Y639 398 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 L7N2F9 121 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 TBX6O95947 436 aaPredicted RBP18.92■□□□□ 0.62
SHOX2-203ENST00000441443 UGT2B7P16662 529 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 OMPP47874 163 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 RPS7P62081 194 aaKnown RBP18.92■□□□□ 0.62
SHOX2-203ENST00000441443 TFAP2EQ6VUC0 442 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 ACBD7Q8N6N7 88 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 KREMEN2Q8NCW0 462 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 SEC22CQ9BRL7 303 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 CACNB4O00305 520 aaPredicted RBP18.92■□□□□ 0.62
SHOX2-203ENST00000441443 PGRMC2O15173 223 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 REM1O75628 298 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 OLFM2O95897 454 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 NMBP08949 121 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 PAICSP22234 425 aaKnown RBP18.92■□□□□ 0.62
SHOX2-203ENST00000441443 PCBP4P57723 403 aaKnown RBP18.92■□□□□ 0.62
SHOX2-203ENST00000441443 TMEM115Q12893 351 aaPredicted RBP18.92■□□□□ 0.62
SHOX2-203ENST00000441443 CDC73Q6P1J9 531 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 FAM198BQ6UWH4 519 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 FAM83HQ6ZRV2 1179 aaPredicted RBP18.92■□□□□ 0.62
SHOX2-203ENST00000441443 HTR3DQ70Z44 454 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 ANKRD33Q7Z3H0 272 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 C17orf47Q8NEP4 570 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 CA10Q9NS85 328 aa18.92■□□□□ 0.62
SHOX2-203ENST00000441443 PIP5K1CO60331 668 aa18.91■□□□□ 0.62
SHOX2-203ENST00000441443 PEX14O75381 377 aa18.91■□□□□ 0.62
SHOX2-203ENST00000441443 PGGHGQ32M88 737 aa18.91■□□□□ 0.62
SHOX2-203ENST00000441443 TMEM255AQ5JRV8 349 aa18.91■□□□□ 0.62
SHOX2-203ENST00000441443 OR10H4Q8NGA5 316 aa18.91■□□□□ 0.62
SHOX2-203ENST00000441443 SGPP1Q9BX95 441 aa18.91■□□□□ 0.62
SHOX2-203ENST00000441443 MGAT4CQ9UBM8 478 aa18.91■□□□□ 0.62
SHOX2-203ENST00000441443 SIGLEC5O15389 551 aa18.91■□□□□ 0.62
SHOX2-203ENST00000441443 UBL3O95164 117 aa18.91■□□□□ 0.62
SHOX2-203ENST00000441443 ATP5A1P25705 553 aaKnown RBP18.91■□□□□ 0.62
SHOX2-203ENST00000441443 IFNGR2P38484 337 aa18.91■□□□□ 0.62
SHOX2-203ENST00000441443 MMP15P51511 669 aa18.91■□□□□ 0.62
SHOX2-203ENST00000441443 SIGLEC14Q08ET2 396 aa18.91■□□□□ 0.62
SHOX2-203ENST00000441443 HACD4Q5VWC8 232 aa18.91■□□□□ 0.62
SHOX2-203ENST00000441443 CXXC5Q7LFL8 322 aaKnown RBP18.91■□□□□ 0.62
SHOX2-203ENST00000441443 WDR26Q9H7D7 661 aa18.91■□□□□ 0.62
SHOX2-203ENST00000441443 LRRN3E7EW58 273 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 NDUFA2O43678 99 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 LATS1O95835 1130 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 GALP22466 123 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 F8A1P23610 371 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 TRHRP34981 398 aaPredicted RBP18.9■□□□□ 0.62
SHOX2-203ENST00000441443 RECQLP46063 649 aaPredicted RBP18.9■□□□□ 0.62
SHOX2-203ENST00000441443 NTHL1P78549 312 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 FUT5Q11128 374 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 PLPP4Q5VZY2 271 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 ATRAIDQ6UW56 229 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 C11orf96Q7Z7L8 435 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 OR11G2Q8NGC1 345 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 BBS10Q8TAM1 723 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 ABHD4Q8TB40 342 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 SAMD8Q96LT4 415 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 LRRN3Q9H3W5 708 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 SLC25A13Q9UJS0 675 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 FBXL2Q9UKC9 423 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 KCNE3Q9Y6H6 103 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 DAPL1A0PJW8 107 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 MID1O15344 667 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms