RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 SEC23BQ15437 767 aa13.19□□□□□ -0.3
LIMD1-202ENST00000440097 GLYR1Q49A26 553 aaPredicted RBP13.19□□□□□ -0.3
LIMD1-202ENST00000440097 SLC35F1Q5T1Q4 408 aa13.19□□□□□ -0.3
LIMD1-202ENST00000440097 PLAG1Q6DJT9 500 aa13.19□□□□□ -0.3
LIMD1-202ENST00000440097 TCTE3Q8IZS6 198 aa13.19□□□□□ -0.3
LIMD1-202ENST00000440097 CAMKK1Q8N5S9 505 aa13.19□□□□□ -0.3
LIMD1-202ENST00000440097 C19orf47Q8N9M1 422 aaKnown RBP13.19□□□□□ -0.3
LIMD1-202ENST00000440097 OR4M1Q8NGD0 313 aa13.19□□□□□ -0.3
LIMD1-202ENST00000440097 SHDQ96IW2 340 aa13.19□□□□□ -0.3
LIMD1-202ENST00000440097 PRR14Q9BWN1 585 aa13.19□□□□□ -0.3
LIMD1-202ENST00000440097 ABCB9Q9NP78 766 aa13.19□□□□□ -0.3
LIMD1-202ENST00000440097 ATP13A2Q9NQ11 1180 aa13.19□□□□□ -0.3
LIMD1-202ENST00000440097 GPR27Q9NS67 375 aa13.19□□□□□ -0.3
LIMD1-202ENST00000440097 SOHLH2Q9NX45 425 aa13.19□□□□□ -0.3
LIMD1-202ENST00000440097 ENOPH1Q9UHY7 261 aa13.19□□□□□ -0.3
LIMD1-202ENST00000440097 KCND3Q9UK17 655 aa13.19□□□□□ -0.3
LIMD1-202ENST00000440097 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 SLC35F4A4IF30 521 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 CDC123O75794 336 aaPredicted RBP13.18□□□□□ -0.3
LIMD1-202ENST00000440097 UBL4AP11441 157 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 LIMS1P48059 325 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 SMIM11AP58511 58 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 CDC42P60953 191 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 BNC1Q01954 994 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 CEBPEQ15744 281 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 BTBD16Q32M84 506 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 MFSD12Q6NUT3 480 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 KLHL17Q6TDP4 642 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 SLC7A13Q8TCU3 470 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 MAP3K3Q99759 626 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 UCK2Q9BZX2 261 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 LYRM4Q9HD34 91 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 BCL2L10Q9HD36 194 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 C11orf16Q9NQ32 467 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 LIPT1Q9Y234 373 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 C10orf142B7Z368 130 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 WWP2O00308 870 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 GALR3O60755 368 aaPredicted RBP13.18□□□□□ -0.3
LIMD1-202ENST00000440097 SCG5P05408 212 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 NME1P15531 152 aaKnown RBP13.18□□□□□ -0.3
LIMD1-202ENST00000440097 RFX3P48380 749 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 GZMKP49863 264 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 PDX1P52945 283 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 TAS2R41P59536 307 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 FZD5Q13467 585 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 LARS2Q15031 903 aaKnown RBP13.18□□□□□ -0.3
LIMD1-202ENST00000440097 QPRTQ15274 297 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 PDZK1Q5T2W1 519 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 IQCF2Q8IXL9 164 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 TMEM52Q8NDY8 209 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 SLC35A4Q96G79 324 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 SLC38A1Q9H2H9 487 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 CALML5Q9NZT1 146 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 SPEF1Q9Y4P9 236 aa13.18□□□□□ -0.3
LIMD1-202ENST00000440097 A0A0A6YYC8 382 aaPredicted RBP13.17□□□□□ -0.3
LIMD1-202ENST00000440097 I3L1I5 382 aaPredicted RBP13.17□□□□□ -0.3
LIMD1-202ENST00000440097 POLR1CO15160 346 aaPredicted RBP13.17□□□□□ -0.3
LIMD1-202ENST00000440097 TMCC2O75069 709 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 CHMP24386 653 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 SSTR4P31391 388 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 UQCRC1P31930 480 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 CRYBB2P43320 205 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 CSNK1EP49674 416 aaKnown RBP13.17□□□□□ -0.3
LIMD1-202ENST00000440097 CCNJQ5T5M9 372 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 PTCHD4Q6ZW05 846 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 USP53Q70EK8 1073 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 GLCCI1Q86VQ1 547 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 PLCZ1Q86YW0 608 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 LIX1LQ8IVB5 337 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 MCATQ8IVS2 390 aaKnown RBP13.17□□□□□ -0.3
LIMD1-202ENST00000440097 ZNF687Q8N1G0 1237 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 FAM181AQ8N9Y4 354 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 GALNT6Q8NCL4 622 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 NLGN4YQ8NFZ3 816 aaPredicted RBP13.17□□□□□ -0.3
LIMD1-202ENST00000440097 FAM174AQ8TBP5 190 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 ENKURQ8TC29 256 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 TGM7Q96PF1 710 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 MIXL1Q9H2W2 232 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 TRIM45Q9H8W5 580 aaPredicted RBP13.17□□□□□ -0.3
LIMD1-202ENST00000440097 KLHL28Q9NXS3 571 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 CNOT2Q9NZN8 540 aaKnown RBP13.17□□□□□ -0.3
LIMD1-202ENST00000440097 CLEC2DQ9UHP7 191 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 TEKT2Q9UIF3 430 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 WDR45Q9Y484 360 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 FABP12A6NFH5 140 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 FAAHO00519 579 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 PLA2G10O15496 165 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 OR10H2O60403 315 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 LGI1O95970 557 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 PROS1P07225 676 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 HLA-DMAP28067 261 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 GPR68Q15743 365 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 XKRXQ6PP77 449 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 GIMAP5Q96F15 307 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 POLR2J3Q9H1A7 115 aaKnown RBP13.17□□□□□ -0.3
LIMD1-202ENST00000440097 MAT2BQ9NZL9 334 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 HCN3Q9P1Z3 774 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 KCNN3Q9UGI6 736 aa13.17□□□□□ -0.3
LIMD1-202ENST00000440097 A4GNTQ9UNA3 340 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms