RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 ARHGAP21Q5T5U3 1957 aa16.1■□□□□ 0.17
CCDC188-201ENST00000439765 MED12Q93074 2177 aa16.1■□□□□ 0.17
CCDC188-201ENST00000439765 B4DXG7 233 aa16.1■□□□□ 0.17
CCDC188-201ENST00000439765 PRSS44E7EML9 344 aa16.1■□□□□ 0.17
CCDC188-201ENST00000439765 CLIC1O00299 241 aa16.1■□□□□ 0.17
CCDC188-201ENST00000439765 PRRG2O14669 202 aa16.1■□□□□ 0.17
CCDC188-201ENST00000439765 FADS1O60427 444 aa16.1■□□□□ 0.17
CCDC188-201ENST00000439765 SLC6A2P23975 617 aa16.1■□□□□ 0.17
CCDC188-201ENST00000439765 CHI3L1P36222 383 aaPredicted RBP16.1■□□□□ 0.17
CCDC188-201ENST00000439765 GAS1P54826 345 aa16.1■□□□□ 0.17
CCDC188-201ENST00000439765 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.1■□□□□ 0.17
CCDC188-201ENST00000439765 MRGPRGQ86SM5 289 aa16.1■□□□□ 0.17
CCDC188-201ENST00000439765 AURKBQ96GD4 344 aaPredicted RBP16.1■□□□□ 0.17
CCDC188-201ENST00000439765 BTBD10Q9BSF8 475 aa16.1■□□□□ 0.17
CCDC188-201ENST00000439765 FBXL2Q9UKC9 423 aa16.1■□□□□ 0.17
CCDC188-201ENST00000439765 GMEB1Q9Y692 573 aa16.1■□□□□ 0.17
CCDC188-201ENST00000439765 ADAM10O14672 748 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 SUSD5O60279 629 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 HCN1O60741 890 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 KRT75O95678 551 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 OXSR1O95747 527 aaPredicted RBP16.09■□□□□ 0.17
CCDC188-201ENST00000439765 C1QCP02747 245 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 MATN1P21941 496 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 TCEA1P23193 301 aaKnown RBP16.09■□□□□ 0.17
CCDC188-201ENST00000439765 NCALDP61601 193 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 WIPI1Q5MNZ9 446 aaPredicted RBP16.09■□□□□ 0.17
CCDC188-201ENST00000439765 DCST2Q5T1A1 773 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 SAXO2Q658L1 398 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 TNFAIP8L2Q6P589 184 aaPredicted RBP16.09■□□□□ 0.17
CCDC188-201ENST00000439765 NCCRP1Q6ZVX7 275 aaPredicted RBP16.09■□□□□ 0.17
CCDC188-201ENST00000439765 YRDCQ86U90 279 aaKnown RBP16.09■□□□□ 0.17
CCDC188-201ENST00000439765 MARCH3Q86UD3 253 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 DOLPP1Q86YN1 238 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 PLCZ1Q86YW0 608 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 DEFB107AQ8IZN7 70 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 OR8J3Q8NGG0 315 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 OR5M9Q8NGP3 310 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 NEURL3Q96EH8 262 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 SH3GL1Q99961 368 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 CPPED1Q9BRF8 314 aaPredicted RBP16.09■□□□□ 0.17
CCDC188-201ENST00000439765 ACKR4Q9NPB9 350 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 PNPLA3Q9NST1 481 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 GIN1Q9NXP7 522 aa16.09■□□□□ 0.17
CCDC188-201ENST00000439765 C15orf38-AP3S2A0A0A6YYH1 394 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 NPIPA5A0A0B4J1W7 369 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 A0A1B0GVC2 190 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 EVPLLA8MZ36 301 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 NPIPA7E9PJI5 369 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 AQP7O14520 342 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 GYG2O15488 501 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 GMFGO60234 142 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 HPNP05981 417 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 NPIPA8P0DM63 369 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 ATP6V1C1P21283 382 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 PPIBP23284 216 aaKnown RBP16.08■□□□□ 0.16
CCDC188-201ENST00000439765 SELPLGQ14242 412 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 EIPR1Q53HC9 387 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 SP5Q6BEB4 398 aaPredicted RBP16.08■□□□□ 0.16
CCDC188-201ENST00000439765 APOOLQ6UXV4 268 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 ARPINQ7Z6K5 226 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 SLC15A3Q8IY34 581 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 GATSQ8NAP1 163 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 FAM83FQ8NEG4 500 aaPredicted RBP16.08■□□□□ 0.16
CCDC188-201ENST00000439765 OR4K17Q8NGC6 315 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 OR4C3Q8NH37 302 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 NEIL3Q8TAT5 605 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 FAM110BQ8TC76 370 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 PNPT1Q8TCS8 783 aaKnown RBP16.08■□□□□ 0.16
CCDC188-201ENST00000439765 MARVELD3Q96A59 401 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 G6PC3Q9BUM1 346 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 OR51I1Q9H343 314 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 DKKL1Q9UK85 242 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 SLC6A5Q9Y345 797 aa16.08■□□□□ 0.16
CCDC188-201ENST00000439765 HCFC1P51610 2035 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 OR14I1A6ND48 311 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 ERICH4A6NGS2 130 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 ANGPTL1O95841 491 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 AGAP20933 346 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 CLK3P49761 638 aaKnown RBP16.07■□□□□ 0.16
CCDC188-201ENST00000439765 RNF144AP50876 292 aaPredicted RBP16.07■□□□□ 0.16
CCDC188-201ENST00000439765 MTPNP58546 118 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 ADORA2A-AS1P86434 159 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 DNAL1Q4LDG9 190 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 RABL3Q5HYI8 236 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 EMC4Q5J8M3 183 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 XKRXQ6PP77 449 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 THUMPD3Q9BV44 507 aaKnown RBP16.07■□□□□ 0.16
CCDC188-201ENST00000439765 TRIM8Q9BZR9 551 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 IKZF5Q9H5V7 419 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 CMTM6Q9NX76 183 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 TMEM181Q9P2C4 612 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 ACAD8Q9UKU7 415 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 PCDHGB3Q9Y5G1 929 aa16.07■□□□□ 0.16
CCDC188-201ENST00000439765 BCKDKO14874 412 aa16.06■□□□□ 0.16
CCDC188-201ENST00000439765 CBR3O75828 277 aa16.06■□□□□ 0.16
CCDC188-201ENST00000439765 OR12D1P0DN82 309 aa16.06■□□□□ 0.16
CCDC188-201ENST00000439765 HPGDP15428 266 aa16.06■□□□□ 0.16
CCDC188-201ENST00000439765 GPX2P18283 190 aa16.06■□□□□ 0.16
CCDC188-201ENST00000439765 KHKP50053 298 aa16.06■□□□□ 0.16
CCDC188-201ENST00000439765 SLC7A2P52569 658 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms