RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 SERINC4A6NH21 518 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 C17orf51A8MQB3 221 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 AHRRA9YTQ3 701 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 FAM47E-STBD1D6RA91 191 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 NPIPA7E9PJI5 369 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 GTPBP1O00178 669 aaKnown RBP10.72□□□□□ -0.69
HSPG2-206ENST00000439717 SLC22A2O15244 555 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 EIF4E2O60573 245 aaKnown RBP10.72□□□□□ -0.69
HSPG2-206ENST00000439717 ZIC2O95409 532 aaPredicted RBP10.72□□□□□ -0.69
HSPG2-206ENST00000439717 H6PDO95479 791 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 NPIPA8P0DM63 369 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 NR2F1P10589 423 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 BMP2P12643 396 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 ETFAP13804 333 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 CPN1P15169 458 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 HK1P19367 917 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 ACVR2AP27037 513 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 LSP1P33241 339 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 SUMO3P55854 103 aaPredicted RBP10.72□□□□□ -0.69
HSPG2-206ENST00000439717 DSTNP60981 165 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 SF3A3Q12874 501 aaKnown RBP eCLIP10.72□□□□□ -0.69
HSPG2-206ENST00000439717 KLF10Q13118 480 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 RGNQ15493 299 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 MAPRE2Q15555 327 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 PDZK1Q5T2W1 519 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 ZNF585AQ6P3V2 769 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 ENPP6Q6UWR7 440 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 FRRS1Q6ZNA5 592 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 MSRB3Q8IXL7 192 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 ANKFN1Q8N957 763 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 GATSQ8NAP1 163 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 OR5M9Q8NGP3 310 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 PHOSPHO1Q8TCT1 267 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 AURKBQ96GD4 344 aaPredicted RBP10.72□□□□□ -0.69
HSPG2-206ENST00000439717 CCDC120Q96HB5 630 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 SFXN2Q96NB2 322 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 PIGQQ9BRB3 760 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 MTHFD2LQ9H903 347 aaPredicted RBP10.72□□□□□ -0.69
HSPG2-206ENST00000439717 SLC25A37Q9NYZ2 338 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 CALML5Q9NZT1 146 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 VAPAQ9P0L0 249 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 SLAMF8Q9P0V8 285 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 TNFRSF10DQ9UBN6 386 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 C7orf72A4D263 438 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 GMNCA6NCL1 334 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 EVPLLA8MZ36 301 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 ZNF264O43296 627 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 HCRTR2O43614 444 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 CCDC22O60826 627 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 TNFRSF21O75509 655 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 CHRM4P08173 479 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 TFPTP0C1Z6 253 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 UBL4AP11441 157 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 CD1EP15812 388 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 ZNF17P17021 662 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 AGAP20933 346 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 P2RX1P51575 399 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 SMSP52788 366 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 SEC24CP53992 1094 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 CRISP3P54108 245 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 B3GALT5-AS1P59052 145 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 CHRNEQ04844 493 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 FGFBP1Q14512 234 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 BCL2A1Q16548 175 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 SYPL1Q16563 259 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 TMEM44Q2T9K0 475 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 COQ5Q5HYK3 327 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 DLEU7Q6UYE1 221 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 C3P1Q6ZMU1 363 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 EIF3MQ7L2H7 374 aaKnown RBP10.71□□□□□ -0.69
HSPG2-206ENST00000439717 SPATA21Q7Z572 469 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 ULK2Q8IYT8 1036 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 ZNF614Q8N883 585 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 TOR1AIP2Q8NFQ8 470 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 ZBTB8AQ96BR9 441 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 WDYHV1Q96HA8 205 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 SH3YL1Q96HL8 342 aaPredicted RBP10.71□□□□□ -0.69
HSPG2-206ENST00000439717 SLC38A1Q9H2H9 487 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 A4GALTQ9NPC4 353 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.71□□□□□ -0.69
HSPG2-206ENST00000439717 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.71□□□□□ -0.69
HSPG2-206ENST00000439717 KCNE5Q9UJ90 142 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 ICAM5Q9UMF0 924 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 SLC35A3Q9Y2D2 325 aa10.71□□□□□ -0.69
HSPG2-206ENST00000439717 RPH3AQ9Y2J0 694 aaPredicted RBP10.71□□□□□ -0.69
HSPG2-206ENST00000439717 BAHCC1Q9P281 2608 aa10.7□□□□□ -0.7
HSPG2-206ENST00000439717 A0A0G2JPF8 293 aa10.7□□□□□ -0.7
HSPG2-206ENST00000439717 AGAP5A6NIR3 686 aa10.7□□□□□ -0.7
HSPG2-206ENST00000439717 BBIP1A8MTZ0 92 aa10.7□□□□□ -0.7
HSPG2-206ENST00000439717 HNRNPCL2B2RXH8 293 aa10.7□□□□□ -0.7
HSPG2-206ENST00000439717 HNRNPCL3B7ZW38 293 aa10.7□□□□□ -0.7
HSPG2-206ENST00000439717 HNRNPCL1O60812 293 aaKnown RBP10.7□□□□□ -0.7
HSPG2-206ENST00000439717 ZG16O60844 167 aa10.7□□□□□ -0.7
HSPG2-206ENST00000439717 CSTAP01040 98 aa10.7□□□□□ -0.7
HSPG2-206ENST00000439717 HNRNPCL4P0DMR1 293 aa10.7□□□□□ -0.7
HSPG2-206ENST00000439717 PEPDP12955 493 aa10.7□□□□□ -0.7
HSPG2-206ENST00000439717 GPX2P18283 190 aa10.7□□□□□ -0.7
HSPG2-206ENST00000439717 DRD4P21917 467 aa10.7□□□□□ -0.7
HSPG2-206ENST00000439717 LHX2P50458 406 aa10.7□□□□□ -0.7
HSPG2-206ENST00000439717 ZNF41P51814 821 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms