RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 NTSR1P30989 418 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 GCGRP47871 477 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 MTNR1BP49286 362 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 GZMKP49863 264 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 FGL2Q14314 439 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 KRT33BQ14525 404 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 TMEM196Q5HYL7 178 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 ZNF425Q6IV72 752 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 MFSD12Q6NUT3 480 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 SMARCD3Q6STE5 483 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 ZNF836Q6ZNA1 936 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 CXXC5Q7LFL8 322 aaKnown RBP15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 NANOGNBQ7Z5D8 188 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 CPOQ8IVL8 374 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 GID4Q8IVV7 300 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 ADAMTS15Q8TE58 950 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 OTULINQ96BN8 352 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 C10orf90Q96M02 699 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 UBL7Q96S82 380 aaPredicted RBP15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 C6orf106Q9H6K1 298 aaPredicted RBP15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 SPHK1Q9NYA1 384 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 H2AFY2Q9P0M6 372 aaPredicted RBP15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 NTMQ9P121 344 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 PLEKHM1Q9Y4G2 1056 aa15.26■□□□□ 0.03
CLCNKA-203ENST00000439316 DUXAA6NLW8 204 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 AGRPO00253 132 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 DVL2O14641 736 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 NARSO43776 548 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 C1QBP02746 253 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 ATP6V1E1P36543 226 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 RNF144AP50876 292 aaPredicted RBP15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 STXBP1P61764 594 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 TNK1Q13470 666 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 CDC73Q6P1J9 531 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 NIPAL3Q6P499 406 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 Q7L0L9 218 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 NR2C2APQ86WQ0 139 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 OR51G2Q8NGK0 314 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 BRIX1Q8TDN6 353 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 MS4A4EQ96PG1 132 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 PHF7Q9BWX1 381 aaPredicted RBP15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 MKRN2Q9H000 416 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 UBQLN3Q9H347 655 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 ISG20L2Q9H9L3 353 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 KRCC1Q9NPI7 259 aaPredicted RBP15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 IL20RAQ9UHF4 553 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 PHF11Q9UIL8 331 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 SLC7A7Q9UM01 511 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 COL6A3P12111 3177 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 ORC5O43913 435 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 ZGLP1P0C6A0 271 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 ELK1P19419 428 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 CMPK1P30085 196 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 CTBP2P56545 445 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 COL9A2Q14055 689 aaPredicted RBP15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 LRRC32Q14392 662 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 PLCZ1Q86YW0 608 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 SLC16A11Q8NCK7 471 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 OR7G2Q8NG99 324 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 JPH3Q8WXH2 748 aaPredicted RBP15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 CDS1Q92903 461 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 TRIM63Q969Q1 353 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 FCRL4Q96PJ5 515 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 TIMP4Q99727 224 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 KCNN2Q9H2S1 579 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 C8orf33Q9H7E9 229 aaPredicted RBP15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 RPRD1BQ9NQG5 326 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 SERGEFQ9UGK8 458 aa15.25■□□□□ 0.03
CLCNKA-203ENST00000439316 MDC1Q14676 2089 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 A0A1W2PP55 124 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 FAM183AA6NL82 134 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 C12orf71A8MTZ7 269 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 ISM1B1AKI9 464 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 KLF8O95600 359 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 AGR2O95994 175 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 ADH1BP00325 375 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 CEACAM5P06731 702 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 ARSBP15848 533 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 INPP1P49441 399 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 ZNF136P52737 540 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 CLPPQ16740 277 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 HBMQ6B0K9 141 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 SDE2Q6IQ49 451 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 HDDC3Q8N4P3 179 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 ACBD7Q8N6N7 88 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 CDX2Q99626 313 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 GABRG3Q99928 467 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 PRSS27Q9BQR3 290 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 ALG8Q9BVK2 526 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 C1QTNF2Q9BXJ5 285 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 SLC6A17Q9H1V8 727 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 FN3KQ9H479 309 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 MTHFD2LQ9H903 347 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 PTGFRNQ9P2B2 879 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 EXTL2Q9UBQ6 330 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 ZNF223Q9UK11 482 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 ZFR2Q9UPR6 939 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 SIRT4Q9Y6E7 314 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 TBC1D3KA0A087X1G2 549 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 LOC102723532A0A0G2JNH3 316 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms