RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 EFR3AQ14156 821 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 PARP6Q2NL67 630 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 OR7E24Q6IFN5 339 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 MRNIPQ6NTE8 343 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 APTXQ7Z2E3 356 aaKnown RBP9.45□□□□□ -0.9
RTN4-211ENST00000438462 LINC00523Q86TU6 105 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 TRABD2AQ86V40 505 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 THOC6Q86W42 341 aaKnown RBP9.45□□□□□ -0.9
RTN4-211ENST00000438462 ADGRG3Q86Y34 549 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 GSPT2Q8IYD1 628 aaKnown RBP9.45□□□□□ -0.9
RTN4-211ENST00000438462 LYG1Q8N1E2 194 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 ADAMTS15Q8TE58 950 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 HIST1H2AHQ96KK5 128 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 KLHL15Q96M94 604 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 HIST1H2AJQ99878 128 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 H2AFJQ9BTM1 129 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 MRI1Q9BV20 369 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 RTN4RQ9BZR6 473 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 PRDM13Q9H4Q3 707 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 SLC17A5Q9NRA2 495 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 CHRAC1Q9NRG0 131 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 UVRAGQ9P2Y5 699 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 LCMT1Q9UIC8 334 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 MAD1L1Q9Y6D9 718 aa9.45□□□□□ -0.9
RTN4-211ENST00000438462 PPIAL4EA0A075B759 164 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 TRAV40A0A0B4J280 105 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 PPIAL4CA0A0B4J2A2 164 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 PPIAL4DF5H284 164 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 APOC4-APOC2K7ER74 178 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 CLGNO14967 610 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 TO15178 435 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 PFDN6O15212 129 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 NCR1O76036 304 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 PLATP00750 562 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 CRYAAP02489 173 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 APOC2P02655 101 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 HSP90AA1P07900 732 aaKnown RBP9.44□□□□□ -0.9
RTN4-211ENST00000438462 ITGA5P08648 1049 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 PPIAL4FP0DN26 164 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 SHC1P29353 583 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 SFTPDP35247 375 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 GRIA1P42261 906 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 RAC1P63000 192 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 EXOSC7Q15024 291 aaKnown RBP9.44□□□□□ -0.9
RTN4-211ENST00000438462 LRRC38Q5VT99 294 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 FBXW9Q5XUX1 488 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 DARS2Q6PI48 645 aaKnown RBP9.44□□□□□ -0.9
RTN4-211ENST00000438462 Q6YL49 198 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 PPP1R21Q6ZMI0 780 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 LARP4Q71RC2 724 aaKnown RBP eCLIP9.44□□□□□ -0.9
RTN4-211ENST00000438462 SDCCAG8Q86SQ7 713 aaPredicted RBP9.44□□□□□ -0.9
RTN4-211ENST00000438462 PALM2Q8IXS6 379 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 TMEM86BQ8N661 226 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 ZSCAN4Q8NAM6 433 aaPredicted RBP9.44□□□□□ -0.9
RTN4-211ENST00000438462 OR52E2Q8NGJ4 325 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 RAB8BQ92930 207 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 KATNB1Q9BVA0 655 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 SORBS1Q9BX66 1292 aaKnown RBP9.44□□□□□ -0.9
RTN4-211ENST00000438462 MMP28Q9H239 520 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 CENPHQ9H3R5 247 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 C16orf95Q9H693 158 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 ZNF442Q9H7R0 627 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 TREX1Q9NSU2 369 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 MS4A12Q9NXJ0 267 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 KLHL9Q9P2J3 617 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 BCAP29Q9UHQ4 241 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 LEF1Q9UJU2 399 aaPredicted RBP9.44□□□□□ -0.9
RTN4-211ENST00000438462 SLC22A14Q9Y267 594 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 CFL2Q9Y281 166 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 PLLPQ9Y342 182 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 DHRS7Q9Y394 339 aa9.44□□□□□ -0.9
RTN4-211ENST00000438462 PHGDHO43175 533 aaKnown RBP9.43□□□□□ -0.9
RTN4-211ENST00000438462 SH3BGRLO75368 114 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 ZNF432O94892 652 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 CD33P20138 364 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 S1PR1P21453 382 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 NT5EP21589 574 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 ME2P23368 584 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 EIF3EP60228 445 aaKnown RBP9.43□□□□□ -0.9
RTN4-211ENST00000438462 NSUN5P1Q3KNT7 163 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 C9orf135Q5VTT2 229 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 GPR180Q86V85 440 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 ACTL9Q8TC94 416 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 EFHD2Q96C19 240 aaPredicted RBP9.43□□□□□ -0.9
RTN4-211ENST00000438462 FBXL8Q96CD0 374 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 RNF145Q96MT1 663 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 ASCL2Q99929 193 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 ASB6Q9NWX5 421 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 PHF11Q9UIL8 331 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 HYOU1Q9Y4L1 999 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 KCNE2Q9Y6J6 123 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 DOCK11Q5JSL3 2073 aa9.43□□□□□ -0.9
RTN4-211ENST00000438462 M0R233 179 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 H2AFYO75367 372 aaKnown RBP9.42□□□□□ -0.9
RTN4-211ENST00000438462 ZFPL1O95159 310 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 MELTFP08582 738 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 C1GALT1C1LP0DN25 315 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 ZNF12P17014 697 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 DRD5P21918 477 aa9.42□□□□□ -0.9
RTN4-211ENST00000438462 LMO1P25800 156 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms