RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 OR51E2Q9H255 320 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 CCL26Q9Y258 94 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 LOC285095A0A1B0GVY8 99 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 WASH4PA8MWX3 477 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 ACTL6BO94805 426 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 PABPC4LP0CB38 370 aaKnown RBP16.15■□□□□ 0.18
PTPRF-209ENST00000438120 NPR2P20594 1047 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 CRABP1P29762 137 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 NOVP48745 357 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 PLGLAQ15195 96 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 RFLNAQ6ZTI6 216 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.15■□□□□ 0.18
PTPRF-209ENST00000438120 CHDHQ8NE62 594 aaPredicted RBP16.15■□□□□ 0.18
PTPRF-209ENST00000438120 TMIEQ8NEW7 156 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 ARRDC2Q8TBH0 407 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 BPIFA2Q96DR5 249 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 FAIMQ9NVQ4 179 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 CITO14578 2027 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 LRRC37A3O60309 1634 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 NUP188Q5SRE5 1749 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 SERPINA5P05154 406 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 ERP29P30040 261 aaKnown RBP16.15■□□□□ 0.18
PTPRF-209ENST00000438120 AHRP35869 848 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 SYPL1Q16563 259 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 OR7D2Q96RA2 312 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 CD93Q9NPY3 652 aa16.15■□□□□ 0.18
PTPRF-209ENST00000438120 CNOT11Q9UKZ1 510 aaKnown RBP16.15■□□□□ 0.18
PTPRF-209ENST00000438120 RFXAPO00287 272 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 DHRS4L1P0CG22 281 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 GABRR1P24046 479 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 CXCR4P61073 352 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 HORMAD2Q8N7B1 307 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 SFXN5Q8TD22 340 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 TM9SF4Q92544 642 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 ZNF775Q96BV0 537 aaPredicted RBP16.14■□□□□ 0.17
PTPRF-209ENST00000438120 PAPOLGQ9BWT3 736 aaKnown RBP16.14■□□□□ 0.17
PTPRF-209ENST00000438120 SAP130Q9H0E3 1048 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 MEPEQ9NQ76 525 aaPredicted RBP16.14■□□□□ 0.17
PTPRF-209ENST00000438120 CD6P30203 668 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 CTHP32929 405 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 C3orf38Q5JPI3 329 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 C16orf58Q96GQ5 468 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 INSM2Q96T92 566 aaPredicted RBP16.14■□□□□ 0.17
PTPRF-209ENST00000438120 TAAR2Q9P1P5 351 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 GJA4P35212 333 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 DAP3P51398 398 aaKnown RBP16.14■□□□□ 0.17
PTPRF-209ENST00000438120 B3GNT9Q6UX72 402 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 EID2Q8N6I1 236 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 CNEP1R1Q8N9A8 125 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 CLEC1AQ8NC01 280 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 APOC3P02656 99 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 CD53P19397 219 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 POU3F2P20265 443 aaPredicted RBP16.14■□□□□ 0.17
PTPRF-209ENST00000438120 PSPHP78330 225 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 RAB41Q5JT25 222 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 ENTPD8Q5MY95 495 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 SLC16A9Q7RTY1 509 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 TMEM150AQ86TG1 271 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 NTMT1Q9BV86 223 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 SLAMF8Q9P0V8 285 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 KIR2DS5A0A0G2JLQ3 304 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 A0A0G2JNG1 304 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 KIR2DS3K7RE56 304 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 AOAHP28039 575 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 SLC6A8P48029 635 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 SLC7A9P82251 487 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 KIR2DS5Q14953 304 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 PROX2Q3B8N5 592 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 MMP28Q9H239 520 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 PLEKHJ1Q9NW61 149 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 LHX3Q9UBR4 397 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 CBLCQ9ULV8 474 aa16.14■□□□□ 0.17
PTPRF-209ENST00000438120 ERVFC1P60507 584 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 FAM53CQ9NYF3 392 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 MYH7P12883 1935 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 MPPED1O15442 326 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 WDPCPO95876 746 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 PENKP01210 267 aaPredicted RBP16.13■□□□□ 0.17
PTPRF-209ENST00000438120 DBHP09172 617 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 OR8U9P0C7N5 309 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 LIPCP11150 499 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 CD38P28907 300 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 FGL2Q14314 439 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 AADACL4Q5VUY2 407 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 CNIH2Q6PI25 160 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 R3HDMLQ9H3Y0 253 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 CSNK1G1Q9HCP0 422 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 HIST1H1TP22492 207 aaPredicted RBP16.13■□□□□ 0.17
PTPRF-209ENST00000438120 TNFRSF4P43489 277 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 GLO1Q04760 184 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 CHRNEQ04844 493 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 KLHDC9Q8NEP7 349 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 PISDQ9UG56 409 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 TMEM189-UBE2V1I3L0A0 370 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 SLC16A7O60669 478 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 T-ENOLP0DO92 83 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 GCH1P30793 250 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 PRSS3P35030 304 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 ACTBP60709 375 aa16.13■□□□□ 0.17
PTPRF-209ENST00000438120 ACTG1P63261 375 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms