RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 LYPD3O95274 346 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 SLC2A10O95528 541 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 EIF2S1P05198 315 aaKnown RBP17.26■□□□□ 0.35
CLK1-205ENST00000434813 IL7P13232 177 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 GLULP15104 373 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 PVRP15151 417 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 NT5EP21589 574 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 MAP3K8P41279 467 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 UBE2IP63279 158 aaKnown RBP17.26■□□□□ 0.35
CLK1-205ENST00000434813 SHC2P98077 582 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 BAK1Q16611 211 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 PRICKLE4Q2TBC4 344 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 WDR88Q6ZMY6 472 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 NCCRP1Q6ZVX7 275 aaPredicted RBP17.26■□□□□ 0.35
CLK1-205ENST00000434813 GID4Q8IVV7 300 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 ARIH2OSQ8N7S6 290 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 FANK1Q8TC84 345 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 OR52D1Q9H346 318 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 NPAP1Q9NZP6 1156 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 CPNE7Q9UBL6 633 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 IL20RAQ9UHF4 553 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 KCNE5Q9UJ90 142 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 A0A1W2PQL4 384 aaPredicted RBP17.26■□□□□ 0.35
CLK1-205ENST00000434813 MBTPS2O43462 519 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 GALR3O60755 368 aaPredicted RBP17.26■□□□□ 0.35
CLK1-205ENST00000434813 AZGP1P25311 298 aaKnown RBP17.26■□□□□ 0.35
CLK1-205ENST00000434813 OR1Q1Q15612 314 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 CARTPTQ16568 116 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 TMEM31Q5JXX7 168 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 XKRXQ6PP77 449 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 TMEM92Q6UXU6 159 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 Q6ZSR6 202 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 CXXC5Q7LFL8 322 aaKnown RBP17.26■□□□□ 0.35
CLK1-205ENST00000434813 NRARPQ7Z6K4 114 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 TMEFF1Q8IYR6 380 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 ZFP41Q8N8Y5 198 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 OR5T3Q8NGG3 340 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 GPBAR1Q8TDU6 330 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 PATE1Q8WXA2 126 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 PMM1Q92871 262 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 FN3KQ9H479 309 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 GRIP1Q9Y3R0 1128 aa17.26■□□□□ 0.35
CLK1-205ENST00000434813 J3QRE1 110 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 PEX12O00623 359 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 FXYD6P3P58550 94 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 TFF2Q03403 129 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 MGAT2Q10469 447 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 ZNF791Q3KP31 576 aaPredicted RBP17.25■□□□□ 0.35
CLK1-205ENST00000434813 ARMC4Q5T2S8 1044 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 AGAP6Q5VW22 663 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 FAM131AQ6UXB0 335 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 SPATC1Q76KD6 591 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 CPOQ8IVL8 374 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 CA13Q8N1Q1 262 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 SIRT6Q8N6T7 355 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 CSNK1A1LQ8N752 337 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 OR52L1Q8NGH7 329 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 DOK4Q8TEW6 326 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 TMEM239Q8WW34 195 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 KIAA1143Q96AT1 154 aaPredicted RBP17.25■□□□□ 0.35
CLK1-205ENST00000434813 AGAP4Q96P64 663 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 SECISBP2Q96T21 854 aaKnown RBP17.25■□□□□ 0.35
CLK1-205ENST00000434813 CDX2Q99626 313 aaPredicted RBP17.25■□□□□ 0.35
CLK1-205ENST00000434813 PHF7Q9BWX1 381 aaPredicted RBP17.25■□□□□ 0.35
CLK1-205ENST00000434813 DPH1Q9BZG8 443 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 UBE2ZQ9H832 354 aaPredicted RBP17.25■□□□□ 0.35
CLK1-205ENST00000434813 POLE3Q9NRF9 147 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 FBXO34Q9NWN3 711 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 SIDT1Q9NXL6 827 aaKnown RBP17.25■□□□□ 0.35
CLK1-205ENST00000434813 HS3ST3A1Q9Y663 406 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 A0A1W2PQ09 198 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 C10orf142B7Z368 130 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 BHLHE40O14503 412 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 SOCS6O14544 535 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 HLA-DPB1P04440 258 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 GKN3PP0CG01 181 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 PTNP21246 168 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 RPL13AP3Q6NVV1 102 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 NIPAL3Q6P499 406 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 SHISA5Q8N114 240 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 EFHD2Q96C19 240 aaPredicted RBP17.25■□□□□ 0.35
CLK1-205ENST00000434813 MSANTD3Q96H12 275 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 HS6ST2Q96MM7 605 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 CD180Q99467 661 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 H2AFY2Q9P0M6 372 aaPredicted RBP17.25■□□□□ 0.35
CLK1-205ENST00000434813 TNFRSF10DQ9UBN6 386 aa17.25■□□□□ 0.35
CLK1-205ENST00000434813 BRINP1O60477 761 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 TNFP01375 233 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 MAKP20794 623 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 RFX2P48378 723 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 BDH1Q02338 343 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 GPR50Q13585 617 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 CCDC85BQ15834 202 aaPredicted RBP17.24■□□□□ 0.35
CLK1-205ENST00000434813 ZNF322Q6U7Q0 402 aaPredicted RBP17.24■□□□□ 0.35
CLK1-205ENST00000434813 ABI3BPQ7Z7G0 1075 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 SLC22A18ASQ8N1D0 253 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 GDPD1Q8N9F7 314 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 OR13H1Q8NG92 308 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 PFN4Q8NHR9 129 aa17.24■□□□□ 0.35
CLK1-205ENST00000434813 SPRYD4Q8WW59 207 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms