RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 LAMP1P11279 417 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ADH6P28332 368 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 IL12BP29460 328 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 DDOSTP39656 456 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ETV3P41162 512 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ERVPABLB-1P60509 514 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 RBMS2Q15434 407 aaKnown RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 GPR153Q6NV75 609 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ARL14EPQ8N8R7 260 aaPredicted RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 AQP11Q8NBQ7 271 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 INO80EQ8NBZ0 244 aaPredicted RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 HASPINQ8TF76 798 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SNRNP27Q8WVK2 155 aaKnown RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 OR1E3Q8WZA6 343 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ALG12Q9BV10 488 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 CEP41Q9BYV8 373 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 DPAGT1Q9H3H5 408 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 PLEKHA1Q9HB21 404 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 MARCH4Q9P2E8 410 aaPredicted RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 CEPT1Q9Y6K0 416 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SCGB2A1O75556 95 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 HLA-DQB1P01920 261 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 MAXP61244 160 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 PUM1Q14671 1186 aaKnown RBP eCLIP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 EXT1Q16394 746 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 CD276Q5ZPR3 534 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 NADSYN1Q6IA69 706 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 LETMD1Q6P1Q0 360 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 S100A7AQ86SG5 101 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 GPAT4Q86UL3 456 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SLC35F3Q8IY50 421 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 CRIPAKQ8N1N5 446 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 OR56B1Q8NGI3 324 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 MALT1Q9UDY8 824 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 MAB21L2Q9Y586 359 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ACTL7AQ9Y615 435 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF292O60281 2723 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 LOC100506127A0A0U1RQW1 187 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 FARS2O95363 451 aaKnown RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ALDOCP09972 364 aaKnown RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 EPORP19235 508 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 TRHRP34981 398 aaPredicted RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ACTR1AP61163 376 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF155Q12901 538 aaPredicted RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 MED22Q15528 200 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 FRMPD2BQ6IN97 320 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SLC18B1Q6NT16 456 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 Q6ZVU0 165 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ARRDC1Q8N5I2 433 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 OR13C4Q8NGS5 318 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 STK35Q8TDR2 534 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 TPD52L3Q96J77 140 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 FEVQ99581 238 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 TM6SF2Q9BZW4 377 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 NUP50Q9UKX7 468 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 EDARQ9UNE0 448 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 FNDC3AQ9Y2H6 1198 aaKnown RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 CA11O75493 328 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 FCER2P06734 321 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ZMAT1Q5H9K5 638 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 TIPARPQ7Z3E1 657 aaKnown RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 OR6V1Q8N148 313 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SPICQ8N5J4 248 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 CSNK1A1LQ8N752 337 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 OR10H5Q8NGA6 315 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SMIM19Q96E16 107 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF350Q9GZX5 532 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ALX4Q9H161 411 aaPredicted RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 GP6Q9HCN6 339 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 JMJD1CQ15652 2540 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ZAR1LA6NP61 321 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 DISC1C4P0D8 188 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 TNFP01375 233 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 AGXTP21549 392 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 MTPNP58546 118 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 MFSD12Q6NUT3 480 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 RNF19BQ6ZMZ0 732 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SLC29A4Q7RTT9 530 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 LDB1Q86U70 411 aaPredicted RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 OR9I1Q8NGQ6 314 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 KLHDC7BQ96G42 594 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SIGLEC11Q96RL6 698 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 DCLRE1CQ96SD1 692 aaKnown RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SLC30A3Q99726 388 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 ATF6BQ99941 703 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 SEMA6AQ9H2E6 1030 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 RHOFQ9HBH0 211 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 POLR1DQ9Y2S0 133 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 FCF1Q9Y324 198 aaKnown RBP3.53□□□□□ -1.84
SHPRH-205ENST00000433355 OR1A2Q9Y585 309 aa3.53□□□□□ -1.84
SHPRH-205ENST00000433355 CHURC1-FNTBB4DL54 471 aa3.53□□□□□ -1.85
SHPRH-205ENST00000433355 NT5C1B-RDH14C9J2C7 533 aa3.53□□□□□ -1.85
SHPRH-205ENST00000433355 SLC22A5O76082 557 aa3.53□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF883P0CG24 379 aa3.53□□□□□ -1.85
SHPRH-205ENST00000433355 HOXB9P17482 250 aaPredicted RBP3.53□□□□□ -1.85
SHPRH-205ENST00000433355 PVALBP20472 110 aaPredicted RBP3.53□□□□□ -1.85
SHPRH-205ENST00000433355 YAP1P46937 504 aaKnown RBP3.53□□□□□ -1.85
SHPRH-205ENST00000433355 TGFBR3Q03167 851 aa3.53□□□□□ -1.85
SHPRH-205ENST00000433355 EGR3Q06889 387 aa3.53□□□□□ -1.85
SHPRH-205ENST00000433355 BAMBIQ13145 260 aa3.53□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms