RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 RSPO2Q6UXX9 243 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-202ENST00000432306 MBOAT1Q6ZNC8 495 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 USP30Q70CQ3 517 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 UTS2BQ765I0 119 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 OR52P1PQ8NH57 321 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 OR52J3Q8NH60 311 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 OVCA2Q8WZ82 227 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 TM9SF4Q92544 642 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 UFD1Q92890 307 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 RGMAQ96B86 450 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 ZNF837Q96EG3 531 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-202ENST00000432306 HIST1H2AHQ96KK5 128 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 PKP4Q99569 1192 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 HIST1H2AJQ99878 128 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 H2AFJQ9BTM1 129 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 TRIM2Q9C040 744 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 PPA2Q9H2U2 334 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 ASB6Q9NWX5 421 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 LYARQ9NX58 379 aaKnown RBP7.54□□□□□ -1.2
VTI1A-202ENST00000432306 PPIL1Q9Y3C6 166 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 PCDHB7Q9Y5E2 793 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-202ENST00000432306 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-202ENST00000432306 OR6C75A6NL08 312 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 J3KTA2 159 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 WWP2O00308 870 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 BNIP3LO60238 219 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 IFNA7P01567 189 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 HOXD4P09016 255 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-202ENST00000432306 ACP2P11117 423 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 ANXA3P12429 323 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 ETFAP13804 333 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 ELAVL4P26378 380 aaKnown RBP7.53□□□□□ -1.2
VTI1A-202ENST00000432306 CCR7P32248 378 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 OR1E2P47887 323 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 RFX3P48380 749 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 GPR15P49685 360 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 CLCNKAP51800 687 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 XKP51811 444 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 CASP9P55211 416 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 CARD18P57730 90 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 HBA1P69905 142 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 CDK5Q00535 292 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 HSF2Q03933 536 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 TAF10Q12962 218 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 ZNF177Q13360 481 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-202ENST00000432306 GAS6Q14393 721 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 AANATQ16613 207 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 KLHL12Q53G59 568 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 SYT14P1Q58G82 188 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 XKR6Q5GH73 641 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 ZDHHC20Q5W0Z9 365 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 FIGNL1Q6PIW4 674 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 BRAT1Q6PJG6 821 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 OGFOD3Q6PK18 319 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 FAM111BQ6SJ93 734 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 SEZ6L2Q6UXD5 910 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 FAM151BQ6UXP7 276 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 TPGS1Q6ZTW0 290 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 MIB1Q86YT6 1006 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 NKAIN4Q8IVV8 208 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 MCEMP1Q8IX19 187 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 UBALD2Q8IYN6 164 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 CLDN19Q8N6F1 224 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 SLC37A3Q8NCC5 494 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 GANCQ8TET4 914 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 ZNF431Q8TF32 576 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-202ENST00000432306 NXPE3Q969Y0 559 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 GTPBP3Q969Y2 492 aaKnown RBP7.53□□□□□ -1.2
VTI1A-202ENST00000432306 ZNF689Q96CS4 500 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-202ENST00000432306 WDR34Q96EX3 536 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 TOE1Q96GM8 510 aaKnown RBP7.53□□□□□ -1.2
VTI1A-202ENST00000432306 ABHD17AQ96GS6 310 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 ZSWIM3Q96MP5 696 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 ELF4Q99607 663 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-202ENST00000432306 P2RY13Q9BPV8 354 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 EBPLQ9BY08 206 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 REEP4Q9H6H4 257 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 WDR26Q9H7D7 661 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 CYSLTR2Q9NS75 346 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 SLCO1C1Q9NYB5 712 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 TAS2R10Q9NYW0 307 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 COPZ2Q9P299 210 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 CPNE7Q9UBL6 633 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 GULP1Q9UBP9 304 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 KIF25Q9UIL4 384 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 SLC22A14Q9Y267 594 aa7.53□□□□□ -1.2
VTI1A-202ENST00000432306 TRBC2A0A5B9 178 aa7.52□□□□□ -1.2
VTI1A-202ENST00000432306 FOXE1O00358 373 aaPredicted RBP7.52□□□□□ -1.2
VTI1A-202ENST00000432306 CIDEAO60543 219 aa7.52□□□□□ -1.2
VTI1A-202ENST00000432306 CYTIPO60759 359 aa7.52□□□□□ -1.2
VTI1A-202ENST00000432306 TBX19O60806 448 aa7.52□□□□□ -1.2
VTI1A-202ENST00000432306 LATS1O95835 1130 aa7.52□□□□□ -1.2
VTI1A-202ENST00000432306 WDPCPO95876 746 aa7.52□□□□□ -1.2
VTI1A-202ENST00000432306 DHFRP00374 187 aa7.52□□□□□ -1.2
VTI1A-202ENST00000432306 POMCP01189 267 aa7.52□□□□□ -1.2
VTI1A-202ENST00000432306 OPN1SWP03999 348 aa7.52□□□□□ -1.2
VTI1A-202ENST00000432306 HLA-DPB1P04440 258 aa7.52□□□□□ -1.2
VTI1A-202ENST00000432306 OR4Q2P0C623 313 aa7.52□□□□□ -1.2
VTI1A-202ENST00000432306 PEPDP12955 493 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms