RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 CPEB2Q7Z5Q1 589 aaKnown RBP3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 TMEM135Q86UB9 458 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 TMEM25Q86YD3 366 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 HDDC3Q8N4P3 179 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 GBP7Q8N8V2 638 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 CCNYQ8ND76 341 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 SUSD6Q92537 303 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 MRPS31Q92665 395 aaKnown RBP3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 GGHQ92820 318 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 OTUB2Q96DC9 234 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 TMA16Q96EY4 203 aaKnown RBP3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 RPRD1AQ96P16 312 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 CDX2Q99626 313 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 EBNA1BP2Q99848 306 aaKnown RBP3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 ROPN1BQ9BZX4 212 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 SLC25A51Q9H1U9 297 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 LINC00597Q9H2U6 94 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 DPEP2Q9H4A9 486 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 ROPN1Q9HAT0 212 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 ZCCHC3Q9NUD5 404 aaKnown RBP3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 FAM118AQ9NWS6 357 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 OR6C2Q9NZP2 312 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 FLRT3Q9NZU0 649 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 LHX3Q9UBR4 397 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 MTRF1LQ9UGC7 380 aaKnown RBP3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 LGALS13Q9UHV8 139 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 TMED7Q9Y3B3 224 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 MTF2Q9Y483 593 aaPredicted RBP3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 MTCH2Q9Y6C9 303 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 COLEC10Q9Y6Z7 277 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 LAMA3Q16787 3333 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 KIAA1549LQ6ZVL6 1849 aa3.67□□□□□ -1.82
SDCBPP2-201ENST00000424643 MYLKQ15746 1914 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 TRBV2A0A0J9YWF9 115 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 C2orf92A0A1B0GVN3 265 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 TCRBV9S1A1TA0A576 114 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 CCDC162PA2VCL2 907 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 ARHGAP42A6NI28 874 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 FAM159BA6NKW6 160 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 SNURFLB1AK76 121 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 M0R296 226 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 DFFAO00273 331 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 TRAFD1O14545 582 aaPredicted RBP3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 TRDMT1O14717 391 aaKnown RBP3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 PSMD3O43242 534 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 BUB3O43684 328 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 GLRA3O75311 464 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 CRYAAP02489 173 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 APRTP07741 180 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 YES1P07947 543 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 GSTA2P09210 222 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 HOXB8P17481 243 aaPredicted RBP3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 IL10P22301 178 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 ELAVL4P26378 380 aaKnown RBP3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 HLA-FP30511 346 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 OR1E1P30953 314 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 CD70P32970 193 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 CDKN1AP38936 164 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 ELK3P41970 407 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 OR3A3P47888 321 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 NPY2RP49146 381 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 SLC18A1P54219 525 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 HERV-K104P61576 105 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 ILF3Q12906 894 aaKnown RBP eCLIP3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 PDIA2Q13087 525 aaKnown RBP3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 EXT1Q16394 746 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 CDKN3Q16667 212 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 MPPE1Q53F39 396 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 DNAJC21Q5F1R6 531 aaKnown RBP3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 TCEAL5Q5H9L2 206 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 TOR1AIP1Q5JTV8 583 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 FAM78AQ5JUQ0 283 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 RABGAP1LQ5R372 815 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 AGBL2Q5U5Z8 902 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 MARC1Q5VT66 337 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 RWDD4Q6NW29 188 aaKnown RBP3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 B3GLCTQ6Y288 498 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 CENPUQ71F23 418 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 PID1Q7Z2X4 250 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 PDIK1LQ8N165 341 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 BATF2Q8N1L9 274 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 ELMOD1Q8N336 334 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 ATPAF2Q8N5M1 289 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 FBXO36Q8NEA4 188 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 OR52E1Q8NGJ3 308 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 DCAKDQ8WVC6 231 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 FCAMRQ8WWV6 532 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 FGF13Q92913 245 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 ISG20Q96AZ6 181 aaKnown RBP3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 C9orf72Q96LT7 481 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 TTC25Q96NG3 672 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 AGAP3Q96P47 875 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 RANBP9Q96S59 729 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 PKP2Q99959 881 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 C19orf43Q9BQ61 176 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 KIFC1Q9BW19 673 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 MRM3Q9HC36 420 aaKnown RBP3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 MED4Q9NPJ6 270 aa3.66□□□□□ -1.82
SDCBPP2-201ENST00000424643 PPANQ9NQ55 473 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms