RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 UBFD1O14562 309 aaKnown RBP14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 ZSCAN12O43309 604 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 NDUFB5O43674 189 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 PRKD3O94806 890 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 OR4F21O95013 312 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 JUNP05412 331 aaKnown RBP14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 YES1P07947 543 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 NGFRP08138 427 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 ME2P23368 584 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 RFX3P48380 749 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 SERPINB8P50452 374 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 NCBP2P52298 156 aaKnown RBP eCLIP14.82□□□□□ -0.046e-9■□□□□ 10.1
CHCHD3-202ENST00000423635 CDH11P55287 796 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 RUNX1T1Q06455 604 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 PPA1Q15181 289 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 RAB35Q15286 201 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 SPIN4Q56A73 249 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 FAM219BQ5XKK7 198 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 TMEM107Q6UX40 140 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 Q6ZT83 130 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 LILRA2Q8N149 483 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 OR4C3Q8NH37 302 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 FAM168AQ92567 244 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 SLC9A6Q92581 669 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 CPNE4Q96A23 557 aaPredicted RBP14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 ELP4Q96EB1 424 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 TMEM185BQ9H7F4 350 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 L2HGDHQ9H9P8 463 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 TIGARQ9NQ88 270 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 SIRT5Q9NXA8 310 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 SAR1BQ9Y6B6 198 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 ABCD4O14678 606 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 KCNH1O95259 989 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 KRT6AP02538 564 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 KRT6BP04259 564 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 IFI6P09912 130 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 TSPAN8P19075 237 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 DDCP20711 480 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 USF1P22415 310 aaPredicted RBP14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 IGFBP5P24593 272 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 GABRA3P34903 492 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 HSD17B3P37058 310 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 PAFAH1B1P43034 410 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 KRT6CP48668 564 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 MANFP55145 182 aaKnown RBP14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 LSM11P83369 360 aaKnown RBP eCLIP14.81□□□□□ -0.043e-10■■■■■ 44.4
CHCHD3-202ENST00000423635 SLC18A2Q05940 514 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 SLC29A2Q14542 456 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 TCHHL1Q5QJ38 904 aaPredicted RBP14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 Q6ZSR9 355 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 ZNF525Q8N782 197 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 C10orf105Q8TEF2 133 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 HOXB13Q92826 284 aaPredicted RBP14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 APIPQ96GX9 242 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 SRXN1Q9BYN0 137 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 ACPTQ9BZG2 426 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 GLIPR2Q9H4G4 154 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 DDX18Q9NVP1 670 aaKnown RBP14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 RNF14Q9UBS8 474 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 MALRD1Q5VYJ5 2156 aa14.81□□□□□ -0.04
CHCHD3-202ENST00000423635 GXYLT2A0PJZ3 443 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 E7EQL1 145 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 ULK1O75385 1050 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 PGM3O95394 542 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 OXSR1O95747 527 aaPredicted RBP14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 PGRP06401 933 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 ZNF16P17020 682 aaPredicted RBP14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 TIA1P31483 386 aaKnown RBP eCLIP14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 MAP3K8P41279 467 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 MAGEA12P43365 314 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 GZMKP49863 264 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 ZNF41P51814 821 aaPredicted RBP14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 ACSM2AQ08AH3 577 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 TIMM23BQ5SRD1 257 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 LIPNQ5VXI9 398 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 ACSM2BQ68CK6 577 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 P2RY8Q86VZ1 359 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 CDYL2Q8N8U2 506 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 MUCL1Q96DR8 90 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 MRRFQ96E11 262 aaKnown RBP14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 DHRS9Q9BPW9 319 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 MANSC1Q9H8J5 431 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 NPAP1Q9NZP6 1156 aa14.8□□□□□ -0.04
CHCHD3-202ENST00000423635 H7C417 338 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 EFNA2O43921 213 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 LINGO3P0C6S8 592 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 COL6A2P12110 1019 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 SHC1P29353 583 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 EIF1P41567 113 aaKnown RBP14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 PLTPP55058 493 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 CAV1Q03135 178 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 CLCQ05315 142 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 C2orf80Q0P641 193 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 TSNAXIP1Q2TAA8 658 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 GLE1Q53GS7 698 aaKnown RBP14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 FAM120AOSQ5T036 256 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 FCRLAQ7L513 359 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 SLC43A2Q8N370 569 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 MUC15Q8N387 334 aa14.79□□□□□ -0.04
CHCHD3-202ENST00000423635 TMEM151AQ8N4L1 468 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms