RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 SH2D5Q6ZV89 423 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 IL17RELQ6ZVW7 336 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 PTCHD4Q6ZW05 846 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 ZNF550Q7Z398 422 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 ASPGQ86U10 573 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 LDB1Q86U70 411 aaPredicted RBP4.36□□□□□ -1.71
SFXN1-202ENST00000421887 VSIG1Q86XK7 387 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 GCNT2Q8N0V5 402 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 LRRC25Q8N386 305 aaPredicted RBP4.36□□□□□ -1.71
SFXN1-202ENST00000421887 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.36□□□□□ -1.71
SFXN1-202ENST00000421887 CNEP1R1Q8N9A8 125 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 OR5T3Q8NGG3 340 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 OR5L2Q8NGL0 311 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 OR9A1PQ8NGU1 263 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 ZPLD1Q8TCW7 415 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 SLC13A3Q8WWT9 602 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 RAPGEF5Q92565 580 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 AKAP1Q92667 903 aaKnown RBP eCLIP4.36□□□□□ -1.71
SFXN1-202ENST00000421887 RNF125Q96EQ8 232 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 RSRC1Q96IZ7 334 aaKnown RBP4.36□□□□□ -1.71
SFXN1-202ENST00000421887 PPP1R2P1Q96PQ5 205 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 HIST1H2AAQ96QV6 131 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 TBL1YQ9BQ87 522 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 DOHHQ9BU89 302 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 ISCUQ9H1K1 167 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 GBA3Q9H227 469 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 RHBGQ9H310 441 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 SMYD2Q9NRG4 433 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 FAM114A2Q9NRY5 505 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 HOMER3Q9NSC5 361 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 DECR2Q9NUI1 292 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 DNAJC11Q9NVH1 559 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 TMEM45AQ9NWC5 275 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 MYO6Q9UM54 1294 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 USP22Q9UPT9 525 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 RUVBL2Q9Y230 463 aaKnown RBP4.36□□□□□ -1.71
SFXN1-202ENST00000421887 LIPT1Q9Y234 373 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 SLC22A7Q9Y694 548 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 PKD1L1Q8TDX9 2849 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 NOTCH1P46531 2555 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 TMEM272A0A1B0GTI8 110 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 A0A1W2PP18 115 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 SYNDIG1LA6NDD5 238 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 FAM90A18PA6NE21 464 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 FAM90A16PA6NEW6 464 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 URADA6NGE7 173 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 LRRC53A6NM62 1247 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 FAM90A9PA6NNJ1 464 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 FAM90A5PA8MXJ8 464 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 STX16-NPEPL1H3BU86 382 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 STX16O14662 325 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 CD3EAPO15446 510 aaKnown RBP4.35□□□□□ -1.71
SFXN1-202ENST00000421887 NDUFS4O43181 175 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 GALR3O60755 368 aaPredicted RBP4.35□□□□□ -1.71
SFXN1-202ENST00000421887 GAS8O95995 478 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 IGHV4-39P01824 125 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 CATP04040 527 aaKnown RBP4.35□□□□□ -1.71
SFXN1-202ENST00000421887 IFNA16P05015 189 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 SERPIND1P05546 499 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 FAM90A15PP0C7V4 464 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 FAM90A14PP0C7W9 464 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 RNH1P13489 461 aaKnown RBP4.35□□□□□ -1.71
SFXN1-202ENST00000421887 ALOX12P18054 663 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 TNNI3P19429 210 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 IGFBP5P24593 272 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 CTNNA2P26232 953 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 TACR3P29371 465 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 PGM1P36871 562 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 SRP14P37108 136 aaKnown RBP4.35□□□□□ -1.71
SFXN1-202ENST00000421887 PCYT1AP49585 367 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 DIO1P49895 249 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 CCR9P51686 369 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 GAS1P54826 345 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 DSCR9P59020 149 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 TAS2R40P59535 323 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 SRYQ05066 204 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 RGS1Q08116 209 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 LOXL1Q08397 574 aaPredicted RBP4.35□□□□□ -1.71
SFXN1-202ENST00000421887 POU6F1Q14863 301 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 DPCR1Q3MIW9 517 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 FAM205BPQ63HN1 556 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 ENPP6Q6UWR7 440 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 CHMP1BQ7LBR1 199 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 ZNF571Q7Z3V5 609 aaPredicted RBP4.35□□□□□ -1.71
SFXN1-202ENST00000421887 P4HA3Q7Z4N8 544 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 VN1R4Q7Z5H5 301 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 ARMC8Q8IUR7 673 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 GRAMD2AQ8IUY3 354 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 KRT222Q8N1A0 295 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 TBC1D19Q8N5T2 526 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 TC2NQ8N9U0 490 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 PPFIBP2Q8ND30 876 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 ZFAND2BQ8WV99 257 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 SLC44A1Q8WWI5 657 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 DAZLQ92904 295 aaKnown RBP4.35□□□□□ -1.71
SFXN1-202ENST00000421887 ABTB1Q969K4 478 aaPredicted RBP4.35□□□□□ -1.71
SFXN1-202ENST00000421887 PGM2Q96G03 612 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 ZNF597Q96LX8 424 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 SYT11Q9BT88 431 aa4.35□□□□□ -1.71
SFXN1-202ENST00000421887 KLHL4Q9C0H6 718 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms