RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 FGF4P08620 206 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 ME2P23368 584 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 MAPK1P28482 360 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 SLC6A8P48029 635 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 RAC1P63000 192 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 POU6F2P78424 691 aaPredicted RBP12.68□□□□□ -0.38
LINC01006-202ENST00000418309 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC01006-202ENST00000418309 KRTAP21-3Q3LHN1 58 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 ARL13AQ5H913 290 aaPredicted RBP12.68□□□□□ -0.38
LINC01006-202ENST00000418309 PDSS1Q5T2R2 415 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 CPTPQ5TA50 214 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 LRIG3Q6UXM1 1119 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 MISPQ8IVT2 679 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 GTPBP8Q8N3Z3 284 aaPredicted RBP12.68□□□□□ -0.38
LINC01006-202ENST00000418309 OR7A2PQ8NGA2 310 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 PIGTQ969N2 578 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 ZBTB8AQ96BR9 441 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 FAM120BQ96EK7 910 aaKnown RBP12.68□□□□□ -0.38
LINC01006-202ENST00000418309 C18orf12Q96KH6 178 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 PPP3R2Q96LZ3 170 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 RNF145Q96MT1 663 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 NPAS1Q99742 590 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 MECRQ9BV79 373 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 BTBD2Q9BX70 525 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 TMEM185BQ9H7F4 350 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 ZCCHC3Q9NUD5 404 aaKnown RBP12.68□□□□□ -0.38
LINC01006-202ENST00000418309 MED17Q9NVC6 651 aa12.68□□□□□ -0.38
LINC01006-202ENST00000418309 PAQR5Q9NXK6 330 aaPredicted RBP12.68□□□□□ -0.38
LINC01006-202ENST00000418309 NF1P21359 2839 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 SCAMP2O15127 329 aaKnown RBP12.67□□□□□ -0.38
LINC01006-202ENST00000418309 CXCL13O43927 109 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 SPAG7O75391 227 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 SLU7O95391 586 aaKnown RBP12.67□□□□□ -0.38
LINC01006-202ENST00000418309 NUDT14O95848 222 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 HMGN2P05204 90 aaKnown RBP12.67□□□□□ -0.38
LINC01006-202ENST00000418309 HOXB4P17483 251 aaPredicted RBP12.67□□□□□ -0.38
LINC01006-202ENST00000418309 ATP6V1C1P21283 382 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 FPR1P21462 350 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 LCN1P31025 176 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 CCKARP32238 428 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 RPL3P39023 403 aaKnown RBP12.67□□□□□ -0.38
LINC01006-202ENST00000418309 IFFO1Q0D2I5 559 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 LASP1Q14847 261 aaKnown RBP12.67□□□□□ -0.38
LINC01006-202ENST00000418309 ACKR1Q16570 336 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 PLPPR5Q32ZL2 321 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 UGT3A2Q3SY77 523 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 SPDYE7PQ495Y7 208 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 HBMQ6B0K9 141 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 ZCCHC23Q6ZST2 131 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 Q71RC1 249 aaPredicted RBP12.67□□□□□ -0.38
LINC01006-202ENST00000418309 BIVMQ86UB2 503 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 CXorf67Q86X51 503 aaPredicted RBP12.67□□□□□ -0.38
LINC01006-202ENST00000418309 BANPQ8N9N5 519 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 OR6K3Q8NGY3 331 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 OR2V1Q8NHB1 315 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 B4GALNT2Q8NHY0 566 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 PHOSPHO1Q8TCT1 267 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 ACTRT2Q8TDY3 377 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC01006-202ENST00000418309 CDS1Q92903 461 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 GMPPAQ96IJ6 420 aaPredicted RBP12.67□□□□□ -0.38
LINC01006-202ENST00000418309 CCL19Q99731 98 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 SMR3AQ99954 134 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 ZNF395Q9H8N7 513 aaPredicted RBP12.67□□□□□ -0.38
LINC01006-202ENST00000418309 FANCFQ9NPI8 374 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 PLSCR4Q9NRQ2 329 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 GIN1Q9NXP7 522 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 SLC17A7Q9P2U7 560 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 GIMAP2Q9UG22 337 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 ATP6V1HQ9UI12 483 aa12.67□□□□□ -0.38
LINC01006-202ENST00000418309 ZNF469Q96JG9 3925 aaPredicted RBP12.67□□□□□ -0.38
LINC01006-202ENST00000418309 HEATR5AQ86XA9 2040 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 HSPA4LO95757 839 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 INHBBP09529 407 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 LAMP1P11279 417 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 CCT3P49368 545 aaKnown RBP12.66□□□□□ -0.38
LINC01006-202ENST00000418309 CARD18P57730 90 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 TP53BP2Q13625 1128 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 MLC1Q15049 377 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 GUSBP1Q15486 140 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 ATP6AP1LQ52LC2 224 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 GTF2IRD2BQ6EKJ0 949 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 ESPNLQ6ZVH7 1005 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 GTF2IRD2Q86UP8 949 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 TRABD2AQ86V40 505 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 RIBC1Q8N443 379 aaPredicted RBP12.66□□□□□ -0.38
LINC01006-202ENST00000418309 ADAMTS15Q8TE58 950 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 OSTF1Q92882 214 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 REXO5Q96IC2 774 aaKnown RBP12.66□□□□□ -0.38
LINC01006-202ENST00000418309 STACQ99469 402 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 PRPF18Q99633 342 aaKnown RBP12.66□□□□□ -0.38
LINC01006-202ENST00000418309 PIP5K1AQ99755 562 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 C1orf50Q9BV19 199 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 PIGUQ9H490 435 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 DUSP22Q9NRW4 184 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 SIRT3Q9NTG7 399 aaPredicted RBP12.66□□□□□ -0.38
LINC01006-202ENST00000418309 ATAD3AQ9NVI7 634 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 MKS1Q9NXB0 559 aa12.66□□□□□ -0.38
LINC01006-202ENST00000418309 FAF1Q9UNN5 650 aaPredicted RBP12.66□□□□□ -0.38
LINC01006-202ENST00000418309 NUP214P35658 2090 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms