RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SERINC4A6NH21 518 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 FAM47E-STBD1D6RA91 191 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 HCRTR2O43614 444 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 UGT2B17O75795 530 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 AGFG2O95081 481 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 ACTL6AO96019 429 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 TFPTP0C1Z6 253 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 ESRRAP11474 423 aaPredicted RBP20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 HK1P19367 917 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 ADH7P40394 386 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 CHRNEQ04844 493 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 CD226Q15762 336 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 GLYR1Q49A26 553 aaPredicted RBP20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 GXYLT1Q4G148 440 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 NHSL2Q5HYW2 709 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 MTFR2Q6P444 385 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 AAGABQ6PD74 315 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 IFNEQ86WN2 208 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 SNX32Q86XE0 403 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 DOLPP1Q86YN1 238 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 RP9Q8TA86 221 aaKnown RBP20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 ABTB1Q969K4 478 aaPredicted RBP20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 C1GALT1C1Q96EU7 318 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 THUMPD3Q9BV44 507 aaKnown RBP20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 SUCOQ9UBS9 1254 aaKnown RBP20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 SH3BGRL2Q9UJC5 107 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 HRH3Q9Y5N1 445 aa20.98■□□□□ 0.95
SMARCB1-205ENST00000417137 A0A087WZY1 265 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 C17orf51A8MQB3 221 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 CCL21O00585 134 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 FBP2O00757 339 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 ZNHIT1O43257 154 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 ZIC3O60481 467 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 EIF4E2O60573 245 aaKnown RBP20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 CHRM4P08173 479 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 BMP2P12643 396 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 GPX2P18283 190 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 VASNQ6EMK4 673 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 EIF3MQ7L2H7 374 aaKnown RBP20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 OLIG3Q7RTU3 272 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 PIGWQ7Z7B1 504 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 CD163Q86VB7 1156 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 METTL25Q8N6Q8 603 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 SLC38A5Q8WUX1 472 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 SH3YL1Q96HL8 342 aaPredicted RBP20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 ANKRD27Q96NW4 1050 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 SH3GL1Q99961 368 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 SLC38A1Q9H2H9 487 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 TP63Q9H3D4 680 aaPredicted RBP20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 CACYBPQ9HB71 228 aaKnown RBP20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 A4GALTQ9NPC4 353 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 GID8Q9NWU2 228 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 SPRR3Q9UBC9 169 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 TINAGQ9UJW2 476 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 SLC6A5Q9Y345 797 aa20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 UBR5O95071 2799 aaPredicted RBP20.97■□□□□ 0.95
SMARCB1-205ENST00000417137 A0A0G2JPF8 293 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 HNRNPCL2B2RXH8 293 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 HNRNPCL3B7ZW38 293 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 C5orf58C9J3I9 102 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 LINC01387J3KSC0 135 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 MRASO14807 208 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 ZNF264O43296 627 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 GMFGO60234 142 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 HNRNPCL1O60812 293 aaKnown RBP20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 TNFRSF21O75509 655 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 CSTAP01040 98 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 BCHEP06276 602 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 HOXD4P09016 255 aaPredicted RBP20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 HNRNPCL4P0DMR1 293 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 UBL4AP11441 157 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 BMP7P18075 431 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 CHMP24386 653 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 P2RX1P51575 399 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 ZNF41P51814 821 aaPredicted RBP20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 SUMO3P55854 103 aaPredicted RBP20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 SF3B4Q15427 424 aaKnown RBP eCLIP20.96■□□□□ 0.953e-8■■■■□ 24.1
SMARCB1-205ENST00000417137 TRMT5Q32P41 509 aaKnown RBP20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 GCNT6Q5T4J0 391 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 PRAMEF8Q5VWM4 474 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 PRAMEF7Q5VXH5 474 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 ENPP6Q6UWR7 440 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 FJX1Q86VR8 437 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 PEX5LQ8IYB4 626 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 PM20D2Q8IYS1 436 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 SFXN2Q96NB2 322 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 TIMP4Q99727 224 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 PIGQQ9BRB3 760 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 CPPED1Q9BRF8 314 aaPredicted RBP20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 KCNE5Q9UJ90 142 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 SLC35A3Q9Y2D2 325 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 CARD8Q9Y2G2 431 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 RPH3AQ9Y2J0 694 aaPredicted RBP20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 ARL2BPQ9Y2Y0 163 aa20.96■□□□□ 0.95
SMARCB1-205ENST00000417137 AGAP5A6NIR3 686 aa20.95■□□□□ 0.94
SMARCB1-205ENST00000417137 FIGNL2A6NMB9 653 aa20.95■□□□□ 0.94
SMARCB1-205ENST00000417137 B4DXG7 233 aa20.95■□□□□ 0.94
SMARCB1-205ENST00000417137 SEMA7AO75326 666 aa20.95■□□□□ 0.94
SMARCB1-205ENST00000417137 GABRA1P14867 456 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms