RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 OR5H6Q8NGV6 325 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 ASB16Q96NS5 453 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 PLA2G2FQ9BZM2 168 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 PCBD2Q9H0N5 130 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 OSGEPL1Q9H4B0 414 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 MEPEQ9NQ76 525 aaPredicted RBP9.17□□□□□ -0.94
SS18-203ENST00000415083 ASB6Q9NWX5 421 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 MRPS2Q9Y399 296 aaKnown RBP9.17□□□□□ -0.94
SS18-203ENST00000415083 C12orf71A8MTZ7 269 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 PEX12O00623 359 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 TSC22D2O75157 780 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 FGF19O95750 216 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 C1QBP02746 253 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 NTSP30990 170 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 STAT5AP42229 794 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 HCCSP53701 268 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 RUNX2Q13950 521 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 QPRTQ15274 297 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 TMEM35AQ53FP2 167 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 CEP78Q5JTW2 689 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 PRSS41Q7RTY9 318 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 C9orf62Q8N4C0 152 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 C7orf57Q8NEG2 295 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 MRPS30Q9NP92 439 aaKnown RBP9.17□□□□□ -0.94
SS18-203ENST00000415083 ZFP64Q9NPA5 681 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 CYSLTR2Q9NS75 346 aa9.17□□□□□ -0.94
SS18-203ENST00000415083 MRPS23Q9Y3D9 190 aaKnown RBP9.17□□□□□ -0.94
SS18-203ENST00000415083 LRP4O75096 1905 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 IMPA2O14732 288 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 REM1O75628 298 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 ADH1CP00326 375 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 RPS4Y1P22090 263 aaKnown RBP9.16□□□□□ -0.94
SS18-203ENST00000415083 ENPP1P22413 925 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 HSD17B2P37059 387 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 RRAS2P62070 204 aaPredicted RBP9.16□□□□□ -0.94
SS18-203ENST00000415083 TGM3Q08188 693 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 ST3GAL3Q11203 375 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 FBXO42Q6P3S6 717 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 OR56A1Q8NGH5 318 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 ENKURQ8TC29 256 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 AHCYL2Q96HN2 611 aaKnown RBP9.16□□□□□ -0.94
SS18-203ENST00000415083 ORAI3Q9BRQ5 295 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 CLDND1Q9NY35 253 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 DEC1Q9P2X7 70 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 THAP10Q9P2Z0 257 aaPredicted RBP9.16□□□□□ -0.94
SS18-203ENST00000415083 KLF15Q9UIH9 416 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 GSAPA4D1B5 854 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 G3V3Q6 166 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 ANKRD34CP0C6C1 535 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 ZNF888P0CJ79 500 aaPredicted RBP9.16□□□□□ -0.94
SS18-203ENST00000415083 IGFALSP35858 605 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 GNA13Q14344 377 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 TIGD3Q6B0B8 471 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 METAP1DQ6UB28 335 aaPredicted RBP9.16□□□□□ -0.94
SS18-203ENST00000415083 CXXC5Q7LFL8 322 aaKnown RBP9.16□□□□□ -0.94
SS18-203ENST00000415083 PXKQ7Z7A4 578 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 KLHL36Q8N4N3 616 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 MFSD9Q8NBP5 474 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 PIGXQ8TBF5 258 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 SNAPC3Q92966 411 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 RNF166Q96A37 237 aaPredicted RBP9.16□□□□□ -0.94
SS18-203ENST00000415083 ACTRT3Q9BYD9 372 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 TWSG1Q9GZX9 223 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 OR52D1Q9H346 318 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 ANKRD19PQ9H560 264 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 SLC28A3Q9HAS3 691 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 TRPV4Q9HBA0 871 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 POLHQ9Y253 713 aa9.16□□□□□ -0.94
SS18-203ENST00000415083 A0A1W2PP55 124 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 BTN3A3O00478 584 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 SLC9A3R1O14745 358 aaPredicted RBP9.15□□□□□ -0.94
SS18-203ENST00000415083 CHP2O43745 196 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 CTSVO60911 334 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 SLC43A1O75387 559 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 SMIM10L1P0DMW3 83 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 HK1P19367 917 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 CSNK2A2P19784 350 aaPredicted RBP9.15□□□□□ -0.94
SS18-203ENST00000415083 CTNNB1P35222 781 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 GCGRP47871 477 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 BTN3A2P78410 334 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 DUSP8Q13202 625 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 SRSF5Q13243 272 aaKnown RBP9.15□□□□□ -0.94
SS18-203ENST00000415083 SF3A2Q15428 464 aaKnown RBP9.15□□□□□ -0.94
SS18-203ENST00000415083 RPE65Q16518 533 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 DGAT2L6Q6ZPD8 337 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 PRR23CQ6ZRP0 262 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 PAQR7Q86WK9 346 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 OR2L13Q8N349 312 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 OR5J2Q8NH18 312 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 HAVCR2Q8TDQ0 301 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 DEDD2Q8WXF8 326 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 OSTF1Q92882 214 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 SMIM10Q96HG1 83 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 SDF2Q99470 211 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 ALG8Q9BVK2 526 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 GHITMQ9H3K2 345 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 HEXA-AS1Q9H8Q6 139 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 CD93Q9NPY3 652 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 EXTL2Q9UBQ6 330 aa9.15□□□□□ -0.94
SS18-203ENST00000415083 ADRB1P08588 477 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms