RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ZNF136P52737 540 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 RPP38P78345 283 aaKnown RBP12.15□□□□□ -0.46
CNN3-203ENST00000415017 SKP2Q13309 424 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 LARS2Q15031 903 aaKnown RBP12.15□□□□□ -0.46
CNN3-203ENST00000415017 LINC00303Q3SY05 128 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 LRRC23Q53EV4 343 aaPredicted RBP12.15□□□□□ -0.46
CNN3-203ENST00000415017 TBCELQ5QJ74 424 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 C1orf146Q5VVC0 180 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 SLC22A10Q63ZE4 541 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 SLC30A6Q6NXT4 461 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 ENPP6Q6UWR7 440 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 LINC00696Q6ZRV3 163 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 MISPQ8IVT2 679 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 CLIP4Q8N3C7 705 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 ZNF527Q8NB42 609 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 PSD4Q8NDX1 1056 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 PHF10Q8WUB8 498 aaKnown RBP12.15□□□□□ -0.46
CNN3-203ENST00000415017 FAM162AQ96A26 154 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 SLCO4A1Q96BD0 722 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 PYURFQ96I23 114 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 WFDC6Q9BQY6 131 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 HHATLQ9HCP6 504 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.15□□□□□ -0.46
CNN3-203ENST00000415017 DNAJB12Q9NXW2 375 aaKnown RBP12.15□□□□□ -0.46
CNN3-203ENST00000415017 LRFN1Q9P244 771 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 ABI3Q9P2A4 366 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 SEC14L3Q9UDX4 400 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 TUBD1Q9UJT1 453 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 BAG5Q9UL15 447 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 SLC35A3Q9Y2D2 325 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 BOD1L1Q8NFC6 3051 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 PIEZO2Q9H5I5 2752 aa12.15□□□□□ -0.46
CNN3-203ENST00000415017 FREM3P0C091 2139 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 FAAHO00519 579 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 SCDO00767 359 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 SUV39H1O43463 412 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 EIF4E2O60573 245 aaKnown RBP12.14□□□□□ -0.47
CNN3-203ENST00000415017 TPST2O60704 377 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 ADAM11O75078 769 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 SEMA7AO75326 666 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 TRIM3O75382 744 aaPredicted RBP12.14□□□□□ -0.47
CNN3-203ENST00000415017 GMNNO75496 209 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 CIB2O75838 187 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 PRKD3O94806 890 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 ANGPTL1O95841 491 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 GPIP06744 558 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 HOXB6P17509 224 aaKnown RBP12.14□□□□□ -0.47
CNN3-203ENST00000415017 ACAA2P42765 397 aaKnown RBP12.14□□□□□ -0.47
CNN3-203ENST00000415017 RFX3P48380 749 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 DLX5P56178 289 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 CXADRP78310 365 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 RAPSNQ13702 412 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 KPNB1Q14974 876 aaKnown RBP12.14□□□□□ -0.47
CNN3-203ENST00000415017 MRPL2Q5T653 305 aaKnown RBP12.14□□□□□ -0.47
CNN3-203ENST00000415017 BICRALQ6AI39 1079 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 PIWIL3Q7Z3Z3 882 aaKnown RBP12.14□□□□□ -0.47
CNN3-203ENST00000415017 VTCN1Q7Z7D3 282 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 MARCH3Q86UD3 253 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 WDSUB1Q8N9V3 476 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 SMYD1Q8NB12 490 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 TOR1AIP2Q8NFQ8 470 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 OR4D11Q8NGI4 311 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 CNOT9Q92600 299 aaKnown RBP12.14□□□□□ -0.47
CNN3-203ENST00000415017 TMEM41AQ96HV5 264 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 TRIM15Q9C019 465 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 LAT2Q9GZY6 243 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 MAGIXQ9H6Y5 334 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 DEPPQ9NTK1 212 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 CCM2LQ9NUG4 571 aaPredicted RBP12.14□□□□□ -0.47
CNN3-203ENST00000415017 ADPRHL2Q9NX46 363 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 PLA2G3Q9NZ20 509 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 ZMIZ1Q9ULJ6 1067 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 ICAM5Q9UMF0 924 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 HRH3Q9Y5N1 445 aa12.14□□□□□ -0.47
CNN3-203ENST00000415017 TLN1Q9Y490 2541 aaKnown RBP12.14□□□□□ -0.47
CNN3-203ENST00000415017 ETV2O00321 342 aaPredicted RBP12.13□□□□□ -0.47
CNN3-203ENST00000415017 OIP5O43482 229 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 NME2P1O60361 137 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 SNX4O95219 450 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 PDGFAP04085 211 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 CNR1P21554 472 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 NME2P22392 152 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 CASRP41180 1078 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 ST13P50502 369 aaKnown RBP12.13□□□□□ -0.47
CNN3-203ENST00000415017 ZNF117Q03924 483 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 C17orf67Q0P5P2 114 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 FOXO1Q12778 655 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 OR1C1Q15619 314 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 NPTX1Q15818 432 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 EIPR1Q53HC9 387 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 SPINK14Q6IE38 97 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 CBLN3Q6UW01 205 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 HMGN2P46Q86SG4 172 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 FADS6Q8N9I5 356 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 OR10Q1Q8NGQ4 319 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 CANT1Q8WVQ1 401 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 LZICQ8WZA0 190 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 ARSGQ96EG1 525 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 HSH2DQ96JZ2 352 aa12.13□□□□□ -0.47
CNN3-203ENST00000415017 OSBPL11Q9BXB4 747 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms