RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 APCDD1LQ8NCL9 501 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 MORN4Q8NDC4 146 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 B3GNT7Q8NFL0 401 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 OR7G1Q8NGA0 311 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 OR8J3Q8NGG0 315 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 OR56A1Q8NGH5 318 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 OR9A2Q8NGT5 310 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 OR14A16Q8NHC5 309 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 SFXN5Q8TD22 340 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 ELP4Q96EB1 424 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 CGREF1Q99674 301 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 BTBD10Q9BSF8 475 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 INPP5KQ9BT40 448 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 CXorf21Q9HAI6 301 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 PNO1Q9NRX1 252 aaKnown RBP12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 CDC42EP3Q9UKI2 254 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 CFL2Q9Y281 166 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 PCDHB14Q9Y5E9 798 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 GMEB1Q9Y692 573 aa12.31□□□□□ -0.44
RAPGEF1-204ENST00000414781 C17orf105B2RV13 164 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 COQ9O75208 318 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 EFNA1P20827 205 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 ENDOUP21128 410 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 CTSSP25774 331 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 SOAT1P35610 550 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 CHI3L1P36222 383 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 TP53BP2Q13625 1128 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 SPRED3Q2MJR0 410 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 PRICKLE4Q2TBC4 344 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 ZNF750Q32MQ0 723 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 SPATS1Q496A3 300 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 WIPI1Q5MNZ9 446 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 FAM180BQ6P0A1 224 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 ZCCHC12Q6PEW1 402 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 RTL4Q6ZR62 310 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 PGAM4Q8N0Y7 254 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 ARHGAP24Q8N264 748 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 GOLM1Q8NBJ4 401 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 PPWD1Q96BP3 646 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 VMP1Q96GC9 406 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 SGCZQ96LD1 299 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 ANKRD27Q96NW4 1050 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 SLC35A5Q9BS91 424 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 THUMPD3Q9BV44 507 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 RBM24Q9BX46 236 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 PAIP1Q9H074 479 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 DDX18Q9NVP1 670 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 THUMPD1Q9NXG2 353 aaKnown RBP12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 NTMQ9P121 344 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 TESMINQ9Y4I5 508 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 CLDN16Q9Y5I7 305 aa12.3□□□□□ -0.44
RAPGEF1-204ENST00000414781 ABCA1O95477 2261 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 TTC36A6NLP5 189 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 A8MV72 311 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 CLIC1O00299 241 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 DNAJA2O60884 412 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 GSNP06396 782 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 PSME3P61289 254 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 FOXO1Q12778 655 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 CAPRIN1Q14444 709 aaKnown RBP12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 ZNF267Q14586 743 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 RUNDC3AQ59EK9 446 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 ZNF628Q5EBL2 1059 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 NANOGP8Q6NSW7 305 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 TMEM107Q6UX40 140 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 IL20RBQ6UXL0 311 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 OR2L13Q8N349 312 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 RBM15BQ8NDT2 890 aaKnown RBP12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 CTHRC1Q96CG8 243 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 FBXL20Q96IG2 436 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 MMADHCQ9H3L0 296 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 CXorf56Q9H5V9 222 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 CXorf36Q9H7Y0 433 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 NANOGQ9H9S0 305 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 TPT1P8Q9HAU6 139 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 SPAG4Q9NPE6 437 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 SACM1LQ9NTJ5 587 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 ZCCHC3Q9NUD5 404 aaKnown RBP12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 ZNF701Q9NV72 531 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 TAS2R1Q9NYW7 299 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 MAT2BQ9NZL9 334 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 COPS7AQ9UBW8 275 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 PRODH2Q9UF12 536 aa12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 PRPF19Q9UMS4 504 aaKnown RBP12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 FAF1Q9UNN5 650 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 PPIEQ9UNP9 301 aaKnown RBP12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 C19orf53Q9UNZ5 99 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-204ENST00000414781 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.28□□□□□ -0.44
RAPGEF1-204ENST00000414781 RNF103-CHMP3A0A140T963 221 aa12.28□□□□□ -0.44
RAPGEF1-204ENST00000414781 DUXAA6NLW8 204 aa12.28□□□□□ -0.44
RAPGEF1-204ENST00000414781 RNF223E7ERA6 249 aa12.28□□□□□ -0.44
RAPGEF1-204ENST00000414781 G3V3Y1 287 aa12.28□□□□□ -0.44
RAPGEF1-204ENST00000414781 TGFBR3LH3BV60 316 aa12.28□□□□□ -0.44
RAPGEF1-204ENST00000414781 OR2J2O76002 312 aa12.28□□□□□ -0.44
RAPGEF1-204ENST00000414781 ZFAND5O76080 213 aa12.28□□□□□ -0.44
RAPGEF1-204ENST00000414781 OR6B1O95007 311 aa12.28□□□□□ -0.44
RAPGEF1-204ENST00000414781 AGR2O95994 175 aa12.28□□□□□ -0.44
RAPGEF1-204ENST00000414781 PTPN6P29350 595 aa12.28□□□□□ -0.44
RAPGEF1-204ENST00000414781 MC3RP41968 323 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms