RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 RGS1Q08116 209 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 THSD4Q6ZMP0 1018 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 ADGRD2Q7Z7M1 963 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 OR5W2Q8NH69 310 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 FAIM2Q9BWQ8 316 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 ZCCHC2Q9C0B9 1178 aaKnown RBP13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 B3GNT2Q9NY97 397 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 LRRK1Q38SD2 2015 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 OR52A4PA6NMU1 304 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 EFCAB14O75071 495 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 ATF4P18848 351 aaPredicted RBP13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 MAKP20794 623 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 CCR8P51685 355 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 TRAM2Q15035 370 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 DUSP6Q16828 381 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 FAM46CQ5VWP2 391 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 LCTLQ6UWM7 567 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 RASSF6Q6ZTQ3 369 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 OR51A7Q8NH64 312 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 RIT1Q92963 219 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 C4orf36Q96KX1 117 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 FAM83CQ9BQN1 747 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 BTBD1Q9H0C5 482 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 FKRPQ9H9S5 495 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 FBXO34Q9NWN3 711 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 BABAM2Q9NXR7 383 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 ATG2BQ96BY7 2078 aa13.59□□□□□ -0.23
SEMA3F-202ENST00000413852 TRAV27A0A087WT01 109 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 ANKRD61A6NGH8 418 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 MAN2B1O00754 1011 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 IMPA2O14732 288 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 GNB5O14775 395 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 GMDSO60547 372 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 IL9P15248 144 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 BCL6P41182 706 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 FRKP42685 505 aaPredicted RBP13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 CSNK1G2P78368 415 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 GPR68Q15743 365 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 FAM111BQ6SJ93 734 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 Q6ZTK2 550 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 TMEFF1Q8IYR6 380 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 UBE2E3Q969T4 207 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 PMEPA1Q969W9 287 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 SLC41A3Q96GZ6 507 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 PEX11GQ96HA9 241 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 RBP7Q96R05 134 aa13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 METTL17Q9H7H0 456 aaPredicted RBP13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 AK6Q9Y3D8 172 aaKnown RBP13.58□□□□□ -0.23
SEMA3F-202ENST00000413852 ALPK2Q86TB3 2170 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 A0A0G2JK05 382 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 PRRT4C9JH25 899 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 AIFM1O95831 613 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 GSTM3P21266 225 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 KHKP50053 298 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 CLDN12P56749 244 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 TGM3Q08188 693 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 NDUFA9Q16795 377 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 HYAL4Q2M3T9 481 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 ZNF620Q6ZNG0 422 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 CDH24Q86UP0 819 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 TOMM5Q8N4H5 51 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 OR2L2Q8NH16 312 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 OR51Q1Q8NH59 317 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 CDS1Q92903 461 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 SCMH1Q96GD3 660 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 TMEM74BQ9NUR3 256 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 KCMF1Q9P0J7 381 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 ZMIZ1Q9ULJ6 1067 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 POLHQ9Y253 713 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 CHD9Q3L8U1 2897 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 NOTCH4Q99466 2003 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 SNTNA6NMZ2 147 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 DHFRP00374 187 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 HK1P19367 917 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 PAICSP22234 425 aaKnown RBP13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 HTR1FP30939 366 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 PYCR1P32322 319 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 TP53I3Q53FA7 332 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 STPG1Q5TH74 334 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 OAFQ86UD1 273 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 GALNT11Q8NCW6 608 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 NUP43Q8NFH3 380 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 OR2T35Q8NGX2 323 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 GANCQ8TET4 914 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 SLC35A4Q96G79 324 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 FERD3LQ96RJ6 166 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 ZNF559Q9BR84 538 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 GPR174Q9BXC1 333 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 PIGUQ9H490 435 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 USP36Q9P275 1121 aaKnown RBP13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 KCNK6Q9Y257 313 aa13.58□□□□□ -0.24
SEMA3F-202ENST00000413852 TP53BP1Q12888 1972 aaPredicted RBP13.57□□□□□ -0.24
SEMA3F-202ENST00000413852 A0A0A6YYD5 115 aa13.57□□□□□ -0.24
SEMA3F-202ENST00000413852 RPS10-NUDT3A0A1W2PQS6 291 aa13.57□□□□□ -0.24
SEMA3F-202ENST00000413852 LRIT2A6NDA9 550 aa13.57□□□□□ -0.24
SEMA3F-202ENST00000413852 GPR171O14626 319 aa13.57□□□□□ -0.24
SEMA3F-202ENST00000413852 SLC19A2O60779 497 aa13.57□□□□□ -0.24
SEMA3F-202ENST00000413852 ATF1P18846 271 aa13.57□□□□□ -0.24
SEMA3F-202ENST00000413852 DNASE1P24855 282 aa13.57□□□□□ -0.24
SEMA3F-202ENST00000413852 AP2S1P53680 142 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms