RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ZNF844Q08AG5 666 aa14.9□□□□□ -0.02
MRPL55-220ENST00000411464 PLPPR5Q32ZL2 321 aa14.9□□□□□ -0.02
MRPL55-220ENST00000411464 NOXRED1Q6NXP6 359 aa14.9□□□□□ -0.02
MRPL55-220ENST00000411464 PODNL1Q6PEZ8 512 aa14.9□□□□□ -0.02
MRPL55-220ENST00000411464 TRIM46Q7Z4K8 759 aa14.9□□□□□ -0.02
MRPL55-220ENST00000411464 LILRB1Q8NHL6 650 aaPredicted RBP14.9□□□□□ -0.02
MRPL55-220ENST00000411464 ROBO4Q8WZ75 1007 aa14.9□□□□□ -0.02
MRPL55-220ENST00000411464 HSD17B8Q92506 261 aa14.9□□□□□ -0.02
MRPL55-220ENST00000411464 SH3YL1Q96HL8 342 aaPredicted RBP14.9□□□□□ -0.02
MRPL55-220ENST00000411464 RRAGDQ9NQL2 400 aaPredicted RBP14.9□□□□□ -0.02
MRPL55-220ENST00000411464 FBXO34Q9NWN3 711 aa14.9□□□□□ -0.02
MRPL55-220ENST00000411464 ROS1P08922 2347 aa14.9□□□□□ -0.02
MRPL55-220ENST00000411464 USF3Q68DE3 2245 aa14.9□□□□□ -0.02
MRPL55-220ENST00000411464 PSMA4P25789 261 aaKnown RBP14.89□□□□□ -0.03
MRPL55-220ENST00000411464 FOXA1P55317 472 aa14.89□□□□□ -0.03
MRPL55-220ENST00000411464 RNPS1Q15287 305 aaKnown RBP14.89□□□□□ -0.03
MRPL55-220ENST00000411464 NCMAPQ5T1S8 102 aa14.89□□□□□ -0.03
MRPL55-220ENST00000411464 SFRP5Q5T4F7 317 aa14.89□□□□□ -0.03
MRPL55-220ENST00000411464 FIGNL1Q6PIW4 674 aa14.89□□□□□ -0.03
MRPL55-220ENST00000411464 SZRD1Q7Z422 152 aa14.89□□□□□ -0.03
MRPL55-220ENST00000411464 TRABD2AQ86V40 505 aa14.89□□□□□ -0.03
MRPL55-220ENST00000411464 MISPQ8IVT2 679 aa14.89□□□□□ -0.03
MRPL55-220ENST00000411464 C17orf53Q8N3J3 647 aaPredicted RBP14.89□□□□□ -0.03
MRPL55-220ENST00000411464 OR6Y1Q8NGX8 325 aa14.89□□□□□ -0.03
MRPL55-220ENST00000411464 KLHL15Q96M94 604 aa14.89□□□□□ -0.03
MRPL55-220ENST00000411464 GSTO2Q9H4Y5 243 aa14.89□□□□□ -0.03
MRPL55-220ENST00000411464 YAE1D1Q9NRH1 226 aa14.89□□□□□ -0.03
MRPL55-220ENST00000411464 UBQLN4Q9NRR5 601 aa14.89□□□□□ -0.03
MRPL55-220ENST00000411464 LIPT1Q9Y234 373 aa14.89□□□□□ -0.03
MRPL55-220ENST00000411464 STAB1Q9NY15 2570 aa14.89□□□□□ -0.03
MRPL55-220ENST00000411464 RAI1Q7Z5J4 1906 aaPredicted RBP14.88□□□□□ -0.03
MRPL55-220ENST00000411464 A0A1W2PP18 115 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 H3BQF6 201 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 SCDO00767 359 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 UBFD1O14562 309 aaKnown RBP14.88□□□□□ -0.03
MRPL55-220ENST00000411464 PDPK1O15530 556 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 SEC22BO75396 215 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 GCM2O75603 506 aaPredicted RBP14.88□□□□□ -0.03
MRPL55-220ENST00000411464 RSL1D1O76021 490 aaKnown RBP14.88□□□□□ -0.03
MRPL55-220ENST00000411464 GSTA1P08263 222 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 DANCRP0C864 163 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 ADH6P28332 368 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 LCN1P31025 176 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 SFTPDP35247 375 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 ACVR1BP36896 505 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 CDKN1AP38936 164 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 MAP3K8P41279 467 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 EIF1P41567 113 aaKnown RBP14.88□□□□□ -0.03
MRPL55-220ENST00000411464 TSC22D1Q15714 1073 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 GABRG1Q8N1C3 465 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 ZNF619Q8N2I2 560 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 NUP43Q8NFH3 380 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 B4GALNT2Q8NHY0 566 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 ZFP28Q8NHY6 868 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 ABHD3Q8WU67 409 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 HOXB13Q92826 284 aaPredicted RBP14.88□□□□□ -0.03
MRPL55-220ENST00000411464 KISS1RQ969F8 398 aaPredicted RBP14.88□□□□□ -0.03
MRPL55-220ENST00000411464 CPNE4Q96A23 557 aaPredicted RBP14.88□□□□□ -0.03
MRPL55-220ENST00000411464 CCDC126Q96EE4 140 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 EGLN2Q96KS0 407 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 USB1Q9BQ65 265 aaKnown RBP14.88□□□□□ -0.03
MRPL55-220ENST00000411464 SLCO5A1Q9H2Y9 848 aa14.88□□□□□ -0.03
MRPL55-220ENST00000411464 MAGED1Q9Y5V3 778 aaPredicted RBP14.88□□□□□ -0.03
MRPL55-220ENST00000411464 GOLGA8RI6L899 631 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 CD5LO43866 347 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 PRKD3O94806 890 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 KCNK2O95069 426 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 NTN1O95631 604 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 ADAP00813 363 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 ALOX5P09917 674 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 SERPINB4P48594 390 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 MANFP55145 182 aaKnown RBP14.87□□□□□ -0.03
MRPL55-220ENST00000411464 FAPQ12884 760 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 P2RY6Q15077 328 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 TAB1Q15750 504 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 ZNF239Q16600 458 aaKnown RBP14.87□□□□□ -0.03
MRPL55-220ENST00000411464 ZNF672Q499Z4 452 aaPredicted RBP14.87□□□□□ -0.03
MRPL55-220ENST00000411464 ANKRD26P1Q6NSI1 321 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 TFAP2EQ6VUC0 442 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 NUFIP2Q7Z417 695 aaKnown RBP14.87□□□□□ -0.03
MRPL55-220ENST00000411464 HIPK1Q86Z02 1210 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 TUSC5Q8IXB3 177 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 SLC16A11Q8NCK7 471 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 FBXO30Q8TB52 745 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 POC1BQ8TC44 478 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 FAM110BQ8TC76 370 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 RNF128Q8TEB7 428 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 NANOS1Q8WY41 292 aaKnown RBP14.87□□□□□ -0.03
MRPL55-220ENST00000411464 NEUROG1Q92886 237 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 CIDECQ96AQ7 238 aaPredicted RBP14.87□□□□□ -0.03
MRPL55-220ENST00000411464 PPCDCQ96CD2 204 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 ZBED6CLQ96FA7 236 aaPredicted RBP14.87□□□□□ -0.03
MRPL55-220ENST00000411464 METTL2AQ96IZ6 378 aaKnown RBP14.87□□□□□ -0.03
MRPL55-220ENST00000411464 HS6ST2Q96MM7 605 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 MS4A4EQ96PG1 132 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 ALG2Q9H553 416 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 KLHL13Q9P2N7 655 aa14.87□□□□□ -0.03
MRPL55-220ENST00000411464 MXRA5Q9NR99 2828 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 GJE1A6NN92 205 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 NUDT14O95848 222 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms