RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 NOX3Q9HBY0 568 aa0.47□□□□□ -2.33
RNU2-55P-201ENST00000411146 LHX9Q9NQ69 397 aa0.47□□□□□ -2.33
RNU2-55P-201ENST00000411146 SIRT7Q9NRC8 400 aa0.47□□□□□ -2.33
RNU2-55P-201ENST00000411146 ACOXLQ9NUZ1 547 aa0.47□□□□□ -2.33
RNU2-55P-201ENST00000411146 EXOSC1Q9Y3B2 195 aaKnown RBP0.47□□□□□ -2.33
RNU2-55P-201ENST00000411146 UGT2A1Q9Y4X1 527 aa0.47□□□□□ -2.33
RNU2-55P-201ENST00000411146 MAB21L2Q9Y586 359 aa0.47□□□□□ -2.33
RNU2-55P-201ENST00000411146 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.47□□□□□ -2.33
RNU2-55P-201ENST00000411146 SEC16AO15027 2179 aa0.47□□□□□ -2.33
RNU2-55P-201ENST00000411146 PLEKHH1Q9ULM0 1364 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 ZMYM6O95789 1325 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 TTC21BQ7Z4L5 1316 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 COL11A1P12107 1806 aaPredicted RBP0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 IGKV3D-11A0A0A0MRZ8 115 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 SMIM30A4D0T7 59 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 GSAPA4D1B5 854 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 H7C0S8 307 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 LAD1O00515 517 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 WDR46O15213 610 aaKnown RBP0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 TM9SF1O15321 606 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 CFLARO15519 480 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 PPIHO43447 177 aaKnown RBP0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 ZNF780AO75290 641 aaPredicted RBP0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 SPAG7O75391 227 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 STK17BO94768 372 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 TGDSO95455 350 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 CTDNEP1O95476 244 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 CASTP20810 708 aaKnown RBP0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 COX7A1P24310 79 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 CASP2P42575 452 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 PITPNBP48739 271 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 DHPSP49366 369 aaPredicted RBP0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 ST8SIA6P61647 398 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 RPL8P62917 257 aaKnown RBP0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 TFCP2Q12800 502 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 KARSQ15046 597 aaKnown RBP0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 CDKN3Q16667 212 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 CFAP221Q4G0U5 840 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 SPIN3Q5JUX0 258 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 BEND6Q5SZJ8 279 aaPredicted RBP0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 MSANTD1Q6ZTZ1 278 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 HOOK3Q86VS8 718 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 METTL23Q86XA0 190 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 CALHM3Q86XJ0 350 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 SIAH3Q8IW03 269 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 OR8H2Q8N162 312 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 NAT8LQ8N9F0 302 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 OR6X1Q8NH79 312 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 TMEM45BQ96B21 275 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 FAM210BQ96KR6 192 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 GBP5Q96PP8 586 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 TMEM121Q9BTD3 319 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 THUMPD3Q9BV44 507 aaKnown RBP0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 UTP14AQ9BVJ6 771 aaKnown RBP0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 OSBPL8Q9BZF1 889 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 DNAJC17Q9NVM6 304 aaKnown RBP0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 ZNF629Q9UEG4 869 aaPredicted RBP0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 CDH7Q9ULB5 785 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 SAMD4AQ9UPU9 718 aaKnown RBP0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 ENTPD4Q9Y227 616 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 DHRS7Q9Y394 339 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 WDR45Q9Y484 360 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 MMACHCQ9Y4U1 282 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 RFNGQ9Y644 331 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 FKBP7Q9Y680 259 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 PLA2R1Q13018 1463 aa0.46□□□□□ -2.34
RNU2-55P-201ENST00000411146 MROH7-TTC4A0A0A0MT08 1334 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 PPIAL4EA0A075B759 164 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 PPIAL4CA0A0B4J2A2 164 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 LOC100131303A0A0U1RQF7 123 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 SMIM28A0A1B0GU29 152 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 A4D1N5 150 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 CCDC69A6NI79 296 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 PPIAL4DF5H284 164 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 H0YL77 283 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 FCN1O00602 326 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 SS18L1O75177 396 aaPredicted RBP0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 GSTA1P08263 222 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 TLX1NBP0CAT3 122 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 PPIAL4FP0DN26 164 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 VCLP18206 1134 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 XRCC1P18887 633 aaPredicted RBP0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 NTSP30990 170 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 KIR3DL2P43630 455 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 TFPI2P48307 235 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 NOVA1P51513 510 aaKnown RBP0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 STXBP2Q15833 593 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 ANKRD20A4Q4UJ75 823 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 ANKRD20A8PQ5CZ79 823 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 PIGGQ5H8A4 983 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 ANKRD20A2Q5SQ80 823 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 CASC10Q5T4H9 136 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 ANKRD20A1Q5TYW2 823 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 ANKRD20A3Q5VUR7 823 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 NKAIN2Q5VXU1 208 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 DNM1P46Q6ZS02 220 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 LINC00336Q6ZUF6 198 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 ARMCX2Q7L311 632 aa0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 RANBP3LQ86VV4 465 aaPredicted RBP0.45□□□□□ -2.34
RNU2-55P-201ENST00000411146 THNSL1Q8IYQ7 743 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms