RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 SNAP47Q5SQN1 464 aa15.52■□□□□ 0.08
LIMS2-208ENST00000410011 PRPF38BQ5VTL8 546 aaKnown RBP15.52■□□□□ 0.08
LIMS2-208ENST00000410011 NANOGNBQ7Z5D8 188 aa15.52■□□□□ 0.08
LIMS2-208ENST00000410011 C11orf74Q86VG3 221 aa15.52■□□□□ 0.08
LIMS2-208ENST00000410011 NR2C2APQ86WQ0 139 aa15.52■□□□□ 0.08
LIMS2-208ENST00000410011 OR52L1Q8NGH7 329 aa15.52■□□□□ 0.08
LIMS2-208ENST00000410011 SDF2Q99470 211 aa15.52■□□□□ 0.08
LIMS2-208ENST00000410011 ZNF350Q9GZX5 532 aa15.52■□□□□ 0.08
LIMS2-208ENST00000410011 TRPV4Q9HBA0 871 aa15.52■□□□□ 0.08
LIMS2-208ENST00000410011 MRPL39Q9NYK5 338 aaKnown RBP15.52■□□□□ 0.08
LIMS2-208ENST00000410011 KCMF1Q9P0J7 381 aa15.52■□□□□ 0.08
LIMS2-208ENST00000410011 SLC22A31A6NKX4 558 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 ISM1B1AKI9 464 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 LATO43561 262 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 RCBTB2O95199 551 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 SMIM10L1P0DMW3 83 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 BMP7P18075 431 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 NPR2P20594 1047 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 TBXA2RP21731 343 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 TALDO1P37837 337 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 FXYD6P3P58550 94 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 RPS21P63220 83 aaKnown RBP15.52■□□□□ 0.07
LIMS2-208ENST00000410011 RGS1Q08116 209 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 TJAP1Q5JTD0 557 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 PLBD1Q6P4A8 553 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 TMPRSS11FQ6ZWK6 438 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 USP53Q70EK8 1073 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 CREB3L2Q70SY1 520 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 VN1R4Q7Z5H5 301 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 ASPGQ86U10 573 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 TEX19Q8NA77 164 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 OR7G1Q8NGA0 311 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 OR4K14Q8NGD5 310 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 SMIM10Q96HG1 83 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 FCRL4Q96PJ5 515 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 PIGUQ9H490 435 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 CMC2Q9NRP2 79 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 SATB2Q9UPW6 733 aa15.52■□□□□ 0.07
LIMS2-208ENST00000410011 SIRT4Q9Y6E7 314 aaPredicted RBP15.52■□□□□ 0.07
LIMS2-208ENST00000410011 MDC1Q14676 2089 aaKnown RBP15.52■□□□□ 0.07
LIMS2-208ENST00000410011 SC5DO75845 299 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 DBIP07108 87 aaKnown RBP15.51■□□□□ 0.07
LIMS2-208ENST00000410011 THBS2P35442 1172 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 C19orf57Q0VDD7 668 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 PLA1AQ53H76 456 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 GLCCI1Q86VQ1 547 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 OR5W2Q8NH69 310 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 AKAP1Q92667 903 aaKnown RBP eCLIP15.51■□□□□ 0.07
LIMS2-208ENST00000410011 KISS1RQ969F8 398 aaPredicted RBP15.51■□□□□ 0.07
LIMS2-208ENST00000410011 C6orf106Q9H6K1 298 aaPredicted RBP15.51■□□□□ 0.07
LIMS2-208ENST00000410011 EVA1AQ9H8M9 152 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 TMEM5Q9Y2B1 443 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 STON1Q9Y6Q2 735 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 FAM86C2PA6NEL3 165 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 KAT7O95251 611 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 LYPD3O95274 346 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 MT-ND5P03915 603 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 IFI6P09912 130 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 NDUFS1P28331 727 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 CSTF1Q05048 431 aaKnown RBP15.51■□□□□ 0.07
LIMS2-208ENST00000410011 IDNKQ5T6J7 187 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 ZNF767PQ75MW2 155 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 PXKQ7Z7A4 578 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 ABI3BPQ7Z7G0 1075 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 ZNF619Q8N2I2 560 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 SLC2A12Q8TD20 617 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 TM4SF19Q96DZ7 209 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 SERINC2Q96SA4 455 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 THAP7Q9BT49 309 aaPredicted RBP15.51■□□□□ 0.07
LIMS2-208ENST00000410011 HAO2Q9NYQ3 351 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 CXXC1Q9P0U4 656 aaPredicted RBP15.51■□□□□ 0.07
LIMS2-208ENST00000410011 PLEKHM1Q9Y4G2 1056 aa15.51■□□□□ 0.07
LIMS2-208ENST00000410011 A0A0G2JMP0 313 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 LOC102723532A0A0G2JNH3 316 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 A0A0X1KG70 313 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 DAPL1A0PJW8 107 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 FAM183AA6NL82 134 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 PLOD3O60568 738 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 CHRNB1P11230 501 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 PITPNBP48739 271 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 SGCGQ13326 291 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 GPR176Q14439 515 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 DUSP5Q16690 384 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 C2orf27AQ580R0 203 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 GARNL3Q5VVW2 1013 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 ZNF57Q68EA5 555 aaPredicted RBP15.5■□□□□ 0.07
LIMS2-208ENST00000410011 AMIGO1Q86WK6 493 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 KCT2Q8NC54 265 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 OR4M2Q8NGB6 313 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 FANK1Q8TC84 345 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 C17orf50Q8WW18 174 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 TMEM239Q8WW34 195 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 TTC9Q92623 222 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 PTP4A1Q93096 173 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 RFT1Q96AA3 541 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 HYLS1Q96M11 299 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 NDC1Q9BTX1 674 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 TWSG1Q9GZX9 223 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 SLC28A3Q9HAS3 691 aa15.5■□□□□ 0.07
LIMS2-208ENST00000410011 SERGEFQ9UGK8 458 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms