RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 MMP27Q9H306 513 aa18.63■□□□□ 0.57
USP39-204ENST00000409766 FGF20Q9NP95 211 aaPredicted RBP18.63■□□□□ 0.57
USP39-204ENST00000409766 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 ZNF749O43361 778 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 PIAS2O75928 621 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 CH25HO95992 272 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 ENDOUP21128 410 aaKnown RBP18.62■□□□□ 0.57
USP39-204ENST00000409766 BCKDHBP21953 392 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 ETV5P41161 510 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 MTNR1AP48039 350 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 ETV1P50549 477 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 EPHA4P54764 986 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 PGGHGQ32M88 737 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 C3orf38Q5JPI3 329 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 LSRQ86X29 649 aaPredicted RBP18.62■□□□□ 0.57
USP39-204ENST00000409766 GRAMD2AQ8IUY3 354 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 CYP4Z2PQ8N1L4 340 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 METTL27Q8N6F8 245 aaPredicted RBP18.62■□□□□ 0.57
USP39-204ENST00000409766 AMER2Q8N7J2 671 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 CNOT9Q92600 299 aaKnown RBP18.62■□□□□ 0.57
USP39-204ENST00000409766 RNFT2Q96EX2 444 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 ZDHHC12Q96GR4 267 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 NXF2Q9GZY0 626 aaKnown RBP18.62■□□□□ 0.57
USP39-204ENST00000409766 EVA1AQ9H8M9 152 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 MED17Q9NVC6 651 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 A3GALT2U3KPV4 340 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 RHPN2P1A8MT19 583 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 MYL12BO14950 172 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 MAGEB3O15480 346 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 FOSL2P15408 326 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 HSD17B7P56937 341 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 RPS3AP61247 264 aaKnown RBP18.62■□□□□ 0.57
USP39-204ENST00000409766 ITGADQ13349 1161 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 ZNF267Q14586 743 aaPredicted RBP18.62■□□□□ 0.57
USP39-204ENST00000409766 NPSR1Q6W5P4 371 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 OR2T33Q8NG76 320 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 OR51Q1Q8NH59 317 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 PFN4Q8NHR9 129 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 CD180Q99467 661 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 ZNF559Q9BR84 538 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 TEX12Q9BXU0 123 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 C20orf141Q9NUB4 165 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 C14orf105Q9NVL8 296 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 CCDC59Q9P031 241 aaKnown RBP18.62■□□□□ 0.57
USP39-204ENST00000409766 IL20RAQ9UHF4 553 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 RNF215Q9Y6U7 377 aa18.62■□□□□ 0.57
USP39-204ENST00000409766 IRGMA1A4Y4 181 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 H0YIG0 161 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 PRAMEF2O60811 474 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 GPX5O75715 221 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 MAKP20794 623 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 PRKCDQ05655 676 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 MLLT11Q13015 90 aaPredicted RBP18.61■□□□□ 0.57
USP39-204ENST00000409766 C1DQ13901 141 aaKnown RBP18.61■□□□□ 0.57
USP39-204ENST00000409766 INAQ16352 499 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 AADACL4Q5VUY2 407 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 ZNF613Q6PF04 617 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 RCBTB1Q8NDN9 531 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 BRIX1Q8TDN6 353 aaKnown RBP18.61■□□□□ 0.57
USP39-204ENST00000409766 DNASE2BQ8WZ79 361 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 SPACA7Q96KW9 195 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 SAMD8Q96LT4 415 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 CDADC1Q9BWV3 514 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 DPH1Q9BZG8 443 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 SIDT1Q9NXL6 827 aaKnown RBP18.61■□□□□ 0.57
USP39-204ENST00000409766 LRIT1Q9P2V4 623 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 KLHL3Q9UH77 587 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 UNC119BA6NIH7 251 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 SULT1C4O75897 302 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 ZGLP1P0C6A0 271 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 CD1CP29017 333 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 FXYD6P3P58550 94 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.61■□□□□ 0.57
USP39-204ENST00000409766 FUT7Q11130 342 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 GRM7Q14831 915 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 CLDN23Q96B33 292 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 ARSGQ96EG1 525 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 ZNF578Q96N58 590 aaPredicted RBP18.61■□□□□ 0.57
USP39-204ENST00000409766 GUCD1Q96NT3 240 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 UBQLN3Q9H347 655 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 CARD8Q9Y2G2 431 aa18.61■□□□□ 0.57
USP39-204ENST00000409766 H3BMH7 237 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 ADAM11O75078 769 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 CT45A8P0DMV1 189 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 CT45A9P0DMV2 189 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 IFI30P13284 250 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 GCGRP47871 477 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 KCNAB1Q14722 419 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 CT45A2Q5DJT8 189 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 ZNF614Q8N883 585 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 RFKQ969G6 155 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 CNPPD1Q9BV87 410 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 OR52D1Q9H346 318 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 TBC1D17Q9HA65 648 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 TMEM27Q9HBJ8 222 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 ATP13A2Q9NQ11 1180 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 NDUFB11Q9NX14 153 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 DNAJB12Q9NXW2 375 aaKnown RBP18.6■□□□□ 0.57
USP39-204ENST00000409766 ERVK-19Q9WJR5 959 aa18.6■□□□□ 0.57
USP39-204ENST00000409766 A0A0B4J2E0 115 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms