RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 B4DXG7 233 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 RNF223E7ERA6 249 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 RNASET2O00584 256 aaKnown RBP13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 CASKO14936 926 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 CFLARO15519 480 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 SKAP2O75563 359 aaPredicted RBP13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 TNFSF13O75888 250 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 TGM6O95932 706 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 AGR2O95994 175 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 GUSBP08236 651 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 G6PDP11413 515 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 DNAJA1P31689 397 aaKnown RBP13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 AGFG1P52594 562 aaKnown RBP13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 STX3Q13277 289 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 LASP1Q14847 261 aaKnown RBP13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 SGCBQ16585 318 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 DPY19L1Q2PZI1 675 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 AP1ARQ63HQ0 302 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 FIGNL1Q6PIW4 674 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 UBQLNLQ8IYU4 475 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 B4GALNT2Q8NHY0 566 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 JADE3Q92613 823 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 CHMP6Q96FZ7 201 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 C1orf50Q9BV19 199 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 CENPHQ9H3R5 247 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 AKTIPQ9H8T0 292 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 RNF122Q9H9V4 155 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 KCNK9Q9NPC2 374 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 FANCFQ9NPI8 374 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 GPATCH2Q9NW75 528 aa13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 V9GYY5 206 aaPredicted RBP13.1□□□□□ -0.31
NIF3L1-205ENST00000409588 PRSS51A0A1B0GVH4 220 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 WDR91A4D1P6 747 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 ESPNB1AK53 854 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 H3BML4 177 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 ADAMDEC1O15204 470 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 ERLIN1O75477 346 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 PABPC4LP0CB38 370 aaKnown RBP13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 CD8BP10966 210 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 IL11P20809 199 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 ME2P23368 584 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 SUCLG1P53597 346 aaKnown RBP13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 CLNS1AP54105 237 aaKnown RBP13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 ATP12AP54707 1039 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 SUMO3P55854 103 aaPredicted RBP13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 CLDN15P56746 228 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 LRRC74AQ0VAA2 488 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 KLHL26Q53HC5 615 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 ESPNLQ6ZVH7 1005 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 ZNF781Q8N8C0 355 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 ARL8AQ96BM9 186 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 TESCQ96BS2 214 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 STARD4Q96DR4 205 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 FOXC2Q99958 501 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 PINK1Q9BXM7 581 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 DPY30Q9C005 99 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 CXorf36Q9H7Y0 433 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 TIGARQ9NQ88 270 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 DOCK7Q96N67 2140 aa13.09□□□□□ -0.31
NIF3L1-205ENST00000409588 CCDC168Q8NDH2 2452 aa13.08□□□□□ -0.31
NIF3L1-205ENST00000409588 GJE1A6NN92 205 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 SLCO1B7G3V0H7 640 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 ITM2AO43736 263 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 C6orf47O95873 294 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 LBPP18428 481 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 ELK4P28324 431 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 HBA1P69905 142 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 TXNL4AP83876 142 aaKnown RBP13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 PGS1Q32NB8 556 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 DCST2Q5T1A1 773 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 HHATQ5VTY9 493 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 BLOC1S3Q6QNY0 202 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 FAM214BQ7L5A3 538 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 LUZP2Q86TE4 346 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 CDC20BQ86Y33 519 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 GCNT2Q8N0V5 402 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 KRTCAP2Q8N6L1 136 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 RAB3IL1Q8TBN0 382 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 SMPDL3BQ92485 455 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 CDS1Q92903 461 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 YIPF4Q9BSR8 244 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 PRRG4Q9BZD6 226 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 NMUR2Q9GZQ4 415 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 MED17Q9NVC6 651 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 EXD2Q9NVH0 621 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 GALNT8Q9NY28 637 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 GIMAP2Q9UG22 337 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 MCTS1Q9ULC4 181 aaKnown RBP13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 DTNAQ9Y4J8 743 aa13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 GPC6Q9Y625 555 aaPredicted RBP13.08□□□□□ -0.32
NIF3L1-205ENST00000409588 SPG11Q96JI7 2443 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 GTPBP1O00178 669 aaKnown RBP13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 EIF4E2O60573 245 aaKnown RBP13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 MATN1P21941 496 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 DNASE1P24855 282 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 PSMA4P25789 261 aaKnown RBP13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 CD79BP40259 229 aa13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 KIR2DL2P43627 348 aaPredicted RBP13.07□□□□□ -0.32
NIF3L1-205ENST00000409588 P2RX1P51575 399 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms