RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 GFRA1P56159 465 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 CRYZQ08257 329 aaKnown RBP18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 FADDQ13158 208 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 SYPL1Q16563 259 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 ZNF630Q2M218 657 aaPredicted RBP18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 PDZK1Q5T2W1 519 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 MTFR2Q6P444 385 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 C3P1Q6ZMU1 363 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 LRRC74BQ6ZQY2 392 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 SPATA21Q7Z572 469 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 RETREG3Q86VR2 466 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 IFNEQ86WN2 208 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 ANKFN1Q8N957 763 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 OR5M9Q8NGP3 310 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 PHOSPHO1Q8TCT1 267 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 SSC4DQ8WTU2 575 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 ABTB1Q969K4 478 aaPredicted RBP18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 ELAC2Q9BQ52 826 aaKnown RBP18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 VKORC1Q9BQB6 163 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 MEMO1Q9Y316 297 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 MED12Q93074 2177 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 DOPEY2Q9Y3R5 2298 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 FLNBO75369 2602 aaKnown RBP18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 FIGNL2A6NMB9 653 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 SLC22A2O15244 555 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 HCRTR2O43614 444 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 UGT2B17O75795 530 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 ESRRAP11474 423 aaPredicted RBP18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 DRD4P21917 467 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 DSTNP60981 165 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 GNGT1P63211 74 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 CHRNEQ04844 493 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 KLF10Q13118 480 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 GLYR1Q49A26 553 aaPredicted RBP18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 ZNF619Q8N2I2 560 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 ZNF614Q8N883 585 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 PMM1Q92871 262 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 ZG16BQ96DA0 208 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 UGT2B28Q9BY64 529 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 FAM107BQ9H098 131 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 NSRP1Q9H0G5 558 aaKnown RBP18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 P2RX2Q9UBL9 471 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 SUCOQ9UBS9 1254 aaKnown RBP18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 SERINC4A6NH21 518 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 GTPBP1O00178 669 aaKnown RBP18■□□□□ 0.47
PDLIM2-207ENST00000409417 CHRM4P08173 479 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 HOXD4P09016 255 aaPredicted RBP18■□□□□ 0.47
PDLIM2-207ENST00000409417 TFPTP0C1Z6 253 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 BMP2P12643 396 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 HK1P19367 917 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 ZNF117Q03924 483 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 AAGABQ6PD74 315 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 ARSKQ6UWY0 536 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 CPLX4Q7Z7G2 160 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 B4GALNT2Q8NHY0 566 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 SLC38A5Q8WUX1 472 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 CCDC120Q96HB5 630 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 SH3YL1Q96HL8 342 aaPredicted RBP18■□□□□ 0.47
PDLIM2-207ENST00000409417 SFXN2Q96NB2 322 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 SLC38A1Q9H2H9 487 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 MTHFD2LQ9H903 347 aaPredicted RBP18■□□□□ 0.47
PDLIM2-207ENST00000409417 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18■□□□□ 0.47
PDLIM2-207ENST00000409417 RPH3AQ9Y2J0 694 aaPredicted RBP18■□□□□ 0.47
PDLIM2-207ENST00000409417 CAPN7Q9Y6W3 813 aa18■□□□□ 0.47
PDLIM2-207ENST00000409417 A0A087WZY1 265 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 CENPVL1A0A0U1RR11 272 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 GMFGO60234 142 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 CCDC22O60826 627 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 WDR1O75083 606 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 TNFRSF21O75509 655 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 CHMP24386 653 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 ACVR2AP27037 513 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 ADH7P40394 386 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 RNF144AP50876 292 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 B3GALT5-AS1P59052 145 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 MAPRE2Q15555 327 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 MAPK11Q15759 364 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 MAPK14Q16539 360 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 ZNF585AQ6P3V2 769 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 ENPP6Q6UWR7 440 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 DHDDSQ86SQ9 333 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 DMRTA2Q96SC8 542 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 PRDM14Q9GZV8 571 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 CALML5Q9NZT1 146 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 ICAM5Q9UMF0 924 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 CORO2BQ9UQ03 480 aa17.99■□□□□ 0.47
PDLIM2-207ENST00000409417 TMEM247A6NEH6 219 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 AGAP5A6NIR3 686 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 LINC01387J3KSC0 135 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 FBP2O00757 339 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 ZNF264O43296 627 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 SNX3O60493 162 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 ZG16O60844 167 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 RNF224P0DH78 156 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 UBL4AP11441 157 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 GABRA1P14867 456 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 TCEA1P23193 301 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 PTGER4P35408 488 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 CRISP3P54108 245 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 GNA13Q14344 377 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms