RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 RRP8O43159 456 aaKnown RBP23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 CPOQ8IVL8 374 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 FAM71F1Q96KD3 344 aaPredicted RBP23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 HCAR1Q9BXC0 346 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 GPR160Q9UJ42 338 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 COL16A1Q07092 1604 aaPredicted RBP23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 CTHP32929 405 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 LANCL3Q6ZV70 420 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 DEFB123Q8N688 67 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 ZNF443Q9Y2A4 671 aaPredicted RBP23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 CD27P26842 260 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 INHBCP55103 352 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 ATXN7L3Q14CW9 347 aaPredicted RBP23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 PARM1Q6UWI2 310 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 TRUB1Q8WWH5 349 aaKnown RBP23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 OR10A5Q9H207 317 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 OR10A2Q9H208 303 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 LIN28AQ9H9Z2 209 aaKnown RBP23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 REV1Q9UBZ9 1251 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 ALS2Q96Q42 1657 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 CDC14CA4D256 554 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 SLC1A7O00341 560 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 IRS1P35568 1242 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 PRDM4Q9UKN5 801 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 TIAM2Q8IVF5 1701 aa23.54■■□□□ 1.36
SPIRE1-202ENST00000409402 TMEM52BQ4KMG9 183 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 Q8N402 240 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 YY2O15391 372 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 CNOT4O95628 575 aaKnown RBP23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 IFNA5P01569 189 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 DUSP6Q16828 381 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 TMEM205Q6UW68 189 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 DTWD1Q8N5C7 304 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 ZMYND19Q96E35 227 aaPredicted RBP23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 FER1L6-AS2Q96M78 137 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 TWSG1Q9GZX9 223 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 CNOT11Q9UKZ1 510 aaKnown RBP23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 MITFO75030 526 aaPredicted RBP23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 CYB561A3Q8NBI2 242 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 TXLNGYQ9BZA5 131 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 DNAJB11Q9UBS4 358 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 PLSCR5A0PG75 271 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 HLCSP50747 726 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 MAT1AQ00266 395 aaKnown RBP23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 CHFRQ96EP1 664 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 SLC6A18Q96N87 628 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 SYT4Q9H2B2 425 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 ZNF226Q9NYT6 803 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 CSF2P04141 144 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 UQCRC1P31930 480 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 PSPHP78330 225 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 IGFN1Q86VF2 1251 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 SPAG16Q8N0X2 631 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 ATOH8Q96SQ7 321 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 KLHL13Q9P2N7 655 aa23.53■■□□□ 1.36
SPIRE1-202ENST00000409402 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 MMP12P39900 470 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 AIMP2Q13155 320 aaKnown RBP23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 RUNDC3AQ59EK9 446 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 BPIFA2Q96DR5 249 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 ACSS1Q9NUB1 689 aaPredicted RBP23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 CLCA1A8K7I4 914 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 GPX3P22352 226 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 PTGER1P34995 402 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 EIF2S3P41091 472 aaKnown RBP23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 UBE2ZQ9H832 354 aaPredicted RBP23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 RABL2AQ9UBK7 228 aaPredicted RBP23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 RABL2BQ9UNT1 228 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 ZNF337Q9Y3M9 751 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 AIFM1O95831 613 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 EIF2DP41214 584 aaKnown RBP23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 SSR4P51571 173 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 TNFRSF17Q02223 184 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 WDR53Q7Z5U6 358 aaPredicted RBP23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 IL32P24001 234 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 ELMOD2Q8IZ81 293 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 SDR9C7Q8NEX9 313 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 OR51T1Q8NGJ9 327 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 OR5L1Q8NGL2 311 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 POLHQ9Y253 713 aa23.52■■□□□ 1.36
SPIRE1-202ENST00000409402 MMP21Q8N119 569 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 PGBD5Q8N414 524 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 LGALS12Q96DT0 336 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 ALG8Q9BVK2 526 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 SMOXQ9NWM0 555 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 LPLP06858 475 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 DHRS4L1P0CG22 281 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 TCN2P20062 427 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 RNASE10Q5GAN6 216 aaKnown RBP23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 PCDHB10Q9UN67 800 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 ARNTLO00327 626 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 FBP2O00757 339 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 SLC5A2P31639 672 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 CPOXP36551 454 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 METTL4Q8N3J2 472 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 MARVELD2Q8N4S9 558 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 OR5H2Q8NGV7 314 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 HSD17B7P56937 341 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 PCBD1P61457 104 aa23.51■■□□□ 1.35
SPIRE1-202ENST00000409402 ERVK-25P63136 954 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms