RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 MAGEA8P43361 318 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 OR1E2P47887 323 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 PNLIPRP2P54317 469 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 PCBP3P57721 371 aaKnown RBP7.65□□□□□ -1.18
GPC3-203ENST00000406757 TXNL4AP83876 142 aaKnown RBP7.65□□□□□ -1.18
GPC3-203ENST00000406757 HOXC5Q00444 222 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 OC90Q02509 493 aaPredicted RBP7.65□□□□□ -1.18
GPC3-203ENST00000406757 TRAP1Q12931 704 aaKnown RBP7.65□□□□□ -1.18
GPC3-203ENST00000406757 VEZF1Q14119 521 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 FXNQ16595 210 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 MEP1AQ16819 746 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 DUSP7Q16829 419 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 PRR30Q53SZ7 412 aaPredicted RBP7.65□□□□□ -1.18
GPC3-203ENST00000406757 ZNF311Q5JNZ3 666 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 ABHD17BQ5VST6 288 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 PRAMEF20Q5VT98 475 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 IRAK1BP1Q5VVH5 260 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 SPINK14Q6IE38 97 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 JMJD6Q6NYC1 403 aaPredicted RBP7.65□□□□□ -1.18
GPC3-203ENST00000406757 ZNF836Q6ZNA1 936 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 CCDC80Q76M96 950 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 MDGA2Q7Z553 956 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 RBM45Q8IUH3 476 aaKnown RBP7.65□□□□□ -1.18
GPC3-203ENST00000406757 ARMC8Q8IUR7 673 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 CLIP4Q8N3C7 705 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 CATSPER1Q8NEC5 780 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 C17orf47Q8NEP4 570 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 TNIP2Q8NFZ5 429 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 GPR32P1Q8NGA4 272 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 OR52P1PQ8NH57 321 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 VANGL1Q8TAA9 524 aaPredicted RBP7.65□□□□□ -1.18
GPC3-203ENST00000406757 HGDQ93099 445 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 DOCK10Q96BY6 2186 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 ZNF354BQ96LW1 612 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 SEPHS2Q99611 448 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 KLHDC3Q9BQ90 382 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 G6PC3Q9BUM1 346 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 SAP130Q9H0E3 1048 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 ZNF552Q9H707 407 aaPredicted RBP7.65□□□□□ -1.18
GPC3-203ENST00000406757 GORASP2Q9H8Y8 452 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 MTHFD2LQ9H903 347 aaPredicted RBP7.65□□□□□ -1.18
GPC3-203ENST00000406757 GALNT9Q9HCQ5 603 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 BCL2L10Q9HD36 194 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 RLIMQ9NVW2 624 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 ACTR3BQ9P1U1 418 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 MAGEL2Q9UJ55 1249 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 CHST2Q9Y4C5 530 aa7.65□□□□□ -1.18
GPC3-203ENST00000406757 GPC6Q9Y625 555 aaPredicted RBP7.65□□□□□ -1.18
GPC3-203ENST00000406757 TNRC6AQ8NDV7 1962 aaKnown RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 DSPPQ9NZW4 1301 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 USP9XQ93008 2570 aaPredicted RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 PRAMEF25A6NGN4 478 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 AGAP5A6NIR3 686 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 M0R3H8 397 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 KIAA0513O60268 411 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 STAMBPO95630 424 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 OXSR1O95747 527 aaPredicted RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 EPPINO95925 133 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 AK1P00568 194 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 PABPC4LP0CB38 370 aaKnown RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 GKN3PP0CG01 181 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 CCL3P10147 92 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 IL7RP16871 459 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 CD247P20963 164 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 YAP1P46937 504 aaKnown RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 MMP16P51512 607 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 ATP12AP54707 1039 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 ELF3P78545 371 aaPredicted RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 MRPL49Q13405 166 aaKnown RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 TUBA3CQ13748 450 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 GNA13Q14344 377 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 INPP5JQ15735 1006 aaPredicted RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 CD226Q15762 336 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.64□□□□□ -1.19
GPC3-203ENST00000406757 EIF2S3LQ2VIR3 472 aaKnown RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 ZNF791Q3KP31 576 aaPredicted RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 SPATS1Q496A3 300 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 CRB2Q5IJ48 1285 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 INTS11Q5TA45 600 aaKnown RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 AGAP7PQ5VUJ5 663 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 OR5M10Q6IEU7 315 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 LCN8Q6JVE9 175 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 TUBA3EQ6PEY2 450 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 FKBP9P1Q75LS8 142 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 CBLL1Q75N03 491 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 NUP54Q7Z3B4 507 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 PATL1Q86TB9 770 aaKnown RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 LACC1Q8IV20 430 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 SLC30A8Q8IWU4 369 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 METTL25Q8N6Q8 603 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 OR4D11Q8NGI4 311 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 SPPL2AQ8TCT8 520 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 GRHL3Q8TE85 626 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 CNOT9Q92600 299 aaKnown RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 SPACA9Q96E40 222 aaPredicted RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 SH3YL1Q96HL8 342 aaPredicted RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 RSRC1Q96IZ7 334 aaKnown RBP7.64□□□□□ -1.19
GPC3-203ENST00000406757 HSH2DQ96JZ2 352 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 AGAP4Q96P64 663 aa7.64□□□□□ -1.19
GPC3-203ENST00000406757 SIGLEC12Q96PQ1 595 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms