RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 IFT52Q9Y366 437 aa30.43■■■□□ 2.46
CSNK1E-204ENST00000403904 WIF1Q9Y5W5 379 aa30.43■■■□□ 2.46
CSNK1E-204ENST00000403904 KCNJ10P78508 379 aa30.42■■■□□ 2.46
CSNK1E-204ENST00000403904 LY6DQ14210 128 aa30.42■■■□□ 2.46
CSNK1E-204ENST00000403904 TRIM25Q14258 630 aaKnown RBP30.42■■■□□ 2.46
CSNK1E-204ENST00000403904 FGFBP1Q14512 234 aa30.42■■■□□ 2.46
CSNK1E-204ENST00000403904 OIT3Q8WWZ8 545 aa30.42■■■□□ 2.46
CSNK1E-204ENST00000403904 NTNG2Q96CW9 530 aa30.42■■■□□ 2.46
CSNK1E-204ENST00000403904 SNX13Q9Y5W8 968 aa30.42■■■□□ 2.46
CSNK1E-204ENST00000403904 ARPC2O15144 300 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 PEX1O43933 1283 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 GMNNO75496 209 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 THBS1P07996 1170 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 NID1P14543 1247 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 MS4A2Q01362 244 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 LARS2Q15031 903 aaKnown RBP30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 FNDC7Q5VTL7 733 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 OR5M10Q6IEU7 315 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 ZNF836Q6ZNA1 936 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 SLC26A7Q8TE54 656 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 DUSP19Q8WTR2 217 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 FAM162AQ96A26 154 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 SLC25A18Q9H1K4 315 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 MMADHCQ9H3L0 296 aaPredicted RBP30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 ST6GALNAC1Q9NSC7 600 aaPredicted RBP30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 MAGEL2Q9UJ55 1249 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 PCDHGB6Q9Y5F9 930 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 SPENQ96T58 3664 aaKnown RBP30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 PINLYPA6NC86 204 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 H3BNH8 94 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 SNX4O95219 450 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 NADK2Q4G0N4 442 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 LIN52Q52LA3 116 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 PACS2Q86VP3 889 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 OR2M7Q8NG81 312 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 JSRP1Q96MG2 331 aaPredicted RBP30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 FAM173AQ9BQD7 235 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 RLIMQ9NVW2 624 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 HRH3Q9Y5N1 445 aa30.41■■■□□ 2.46
CSNK1E-204ENST00000403904 TPST1O60507 370 aa30.4■■■□□ 2.46
CSNK1E-204ENST00000403904 BCAS1O75363 584 aaPredicted RBP30.4■■■□□ 2.46
CSNK1E-204ENST00000403904 NDUFAF6Q330K2 333 aa30.4■■■□□ 2.46
CSNK1E-204ENST00000403904 PLEKHN1Q494U1 663 aaPredicted RBP30.4■■■□□ 2.46
CSNK1E-204ENST00000403904 MRPL2Q5T653 305 aaKnown RBP30.4■■■□□ 2.46
CSNK1E-204ENST00000403904 SLC6A19Q695T7 634 aa30.4■■■□□ 2.46
CSNK1E-204ENST00000403904 EIF3MQ7L2H7 374 aaKnown RBP30.4■■■□□ 2.46
CSNK1E-204ENST00000403904 FRMD6Q96NE9 622 aa30.4■■■□□ 2.46
CSNK1E-204ENST00000403904 SLC7A8Q9UHI5 535 aa30.4■■■□□ 2.46
CSNK1E-204ENST00000403904 CHST2Q9Y4C5 530 aa30.4■■■□□ 2.46
CSNK1E-204ENST00000403904 TLN1Q9Y490 2541 aaKnown RBP30.4■■■□□ 2.46
CSNK1E-204ENST00000403904 KLRC4-KLRK1H3BQV0 150 aa30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 CSTAP01040 98 aa30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 ADH7P40394 386 aa30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 EEF1A1P68104 462 aaKnown RBP30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 C17orf67Q0P5P2 114 aa30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 DUSP7Q16829 419 aa30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 GLIPR1L2Q4G1C9 344 aa30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 PNPLA5Q7Z6Z6 429 aaPredicted RBP30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 CLIP4Q8N3C7 705 aa30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 ASB9Q96DX5 294 aa30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 GORASP2Q9H8Y8 452 aa30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 SDHAF3Q9NRP4 125 aa30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 TUBA8Q9NY65 449 aaPredicted RBP30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 PPP4R1LQ9P1A2 415 aa30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 PCNX3Q9H6A9 2034 aa30.39■■■□□ 2.46
CSNK1E-204ENST00000403904 GTPBP1O00178 669 aaKnown RBP30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 GNB5O14775 395 aa30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 TRIM3O75382 744 aaPredicted RBP30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 SFTPCP11686 197 aa30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 PRKAR1BP31321 381 aa30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 MASP1P48740 699 aa30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 MEOX1P50221 254 aa30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 PLAURQ03405 335 aa30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 CYBRD1Q53TN4 286 aa30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 SLC39A7Q92504 469 aa30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 UTP4Q969X6 686 aaKnown RBP30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 SH3YL1Q96HL8 342 aaPredicted RBP30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 LUZP4Q9P127 313 aa30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 ACTR3BQ9P1U1 418 aa30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 CARD8Q9Y2G2 431 aa30.38■■■□□ 2.45
CSNK1E-204ENST00000403904 B4DXG7 233 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 OIP5O43482 229 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 SERPINA1P01009 418 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 IFNA14P01570 189 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 UBTFL6P0CB48 400 aaPredicted RBP30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 UBL4AP11441 157 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 CYP2R1Q6VVX0 501 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 MISPQ8IVT2 679 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 WDSUB1Q8N9V3 476 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 OR10Q1Q8NGQ4 319 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 TMEM41AQ96HV5 264 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 LHX6Q9UPM6 363 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 SLC35A3Q9Y2D2 325 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 ATRXP46100 2492 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 PRRC2CQ9Y520 2896 aaKnown RBP30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 CDHR4A6H8M9 788 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 GMFGO60234 142 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 CYP7B1O75881 506 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 RFC3P40938 356 aa30.37■■■□□ 2.45
CSNK1E-204ENST00000403904 ZNF117Q03924 483 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms