RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 GMPR2Q9P2T1 348 aaKnown RBP17.08■□□□□ 0.32
COL18A1-204ENST00000400337 TRAV27A0A087WT01 109 aa17.08■□□□□ 0.32
COL18A1-204ENST00000400337 BOLA2-SMG1P6H3BVE0 249 aa17.08■□□□□ 0.32
COL18A1-204ENST00000400337 PET100P0DJ07 73 aa17.08■□□□□ 0.32
COL18A1-204ENST00000400337 CPOXP36551 454 aa17.08■□□□□ 0.32
COL18A1-204ENST00000400337 TAP2Q03519 686 aa17.08■□□□□ 0.32
COL18A1-204ENST00000400337 TMEM205Q6UW68 189 aa17.08■□□□□ 0.32
COL18A1-204ENST00000400337 TMEM168Q9H0V1 697 aa17.08■□□□□ 0.32
COL18A1-204ENST00000400337 ENPP5Q9UJA9 477 aa17.08■□□□□ 0.32
COL18A1-204ENST00000400337 ZNF443Q9Y2A4 671 aaPredicted RBP17.08■□□□□ 0.32
COL18A1-204ENST00000400337 AP1M2Q9Y6Q5 423 aa17.08■□□□□ 0.32
COL18A1-204ENST00000400337 TRAV18A0A075B6X5 111 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 SNAPC5O75971 98 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 GYPBP06028 91 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 ITGAMP11215 1152 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 IGFBP6P24592 240 aaPredicted RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 CRABP1P29762 137 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 ERP29P30040 261 aaKnown RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 AWAT2Q6E213 333 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 GDPGP1Q6ZNW5 385 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 TMEFF1Q8IYR6 380 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 AK6Q9Y3D8 172 aaKnown RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 UBFD1O14562 309 aaKnown RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 CA5AP35218 305 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 CDKN3Q16667 212 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 C3orf33Q6P1S2 294 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 C1QTNF2Q9BXJ5 285 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 RANBP3Q9H6Z4 567 aaPredicted RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 MYEF2Q9P2K5 600 aaKnown RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 CBLCQ9ULV8 474 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 GJE1A6NN92 205 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 SLC33A1O00400 549 aaPredicted RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 CREBL2O60519 120 aaPredicted RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 CDK1P06493 297 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 EN2P19622 333 aaPredicted RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 UQCRC1P31930 480 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 MMP12P39900 470 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 FOLR3P41439 243 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 MAVSQ7Z434 540 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 TREX2Q9BQ50 279 aaPredicted RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 PTRH2Q9Y3E5 179 aaKnown RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 CDC14CA4D256 554 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 GGT3PA6NGU5 568 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 F5H0A9 414 aaPredicted RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 H7C417 338 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 OR2T1O43869 369 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 ARAFP10398 606 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 HMBOX1Q6NT76 420 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 ARSKQ6UWY0 536 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 SLCO4C1Q6ZQN7 724 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 ZNF740Q8NDX6 193 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 MZB1Q8WU39 189 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 MAELQ96JY0 434 aaKnown RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 BTBD2Q9BX70 525 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 POT1Q9NUX5 634 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 COPZ2Q9P299 210 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 FAM183AA6NL82 134 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 IL7P13232 177 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 C21orf33P30042 268 aaPredicted RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 MECP2P51608 486 aaKnown RBP17.07■□□□□ 0.32
COL18A1-204ENST00000400337 RAB40BQ12829 278 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 OR7A5Q15622 319 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 MFSD9Q8NBP5 474 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 SFXN2Q96NB2 322 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 SYNPO2LQ9H987 977 aa17.07■□□□□ 0.32
COL18A1-204ENST00000400337 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.06■□□□□ 0.32
COL18A1-204ENST00000400337 RFXAPO00287 272 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 CACNG3O60359 315 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 TMEM225BP0DP42 221 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 EMX1Q04741 257 aaPredicted RBP17.06■□□□□ 0.32
COL18A1-204ENST00000400337 RSU1Q15404 277 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 IL17RCQ8NAC3 791 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 OR6Q1Q8NGQ2 317 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 SPPL3Q8TCT6 385 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 OR2S2Q9NQN1 319 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 ACOT7O00154 380 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 SLC2A5P22732 501 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 CFL1P23528 166 aaKnown RBP17.06■□□□□ 0.32
COL18A1-204ENST00000400337 ZNF691Q5VV52 312 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 B3GNT8Q7Z7M8 397 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 OR8J2Q8NGG1 315 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 PAQR5Q9NXK6 330 aaPredicted RBP17.06■□□□□ 0.32
COL18A1-204ENST00000400337 KLHL9Q9P2J3 617 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 KCNN3Q9UGI6 736 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 DRD5P21918 477 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 PSMB10P40306 273 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 TDGQ13569 410 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 NR0B2Q15466 257 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 OR1Q1Q15612 314 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 CCDC58Q4VC31 144 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 MFSD8Q8NHS3 518 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 UBTD2Q8WUN7 234 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 C7orf34Q96L11 122 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 MEPEQ9NQ76 525 aaPredicted RBP17.06■□□□□ 0.32
COL18A1-204ENST00000400337 CARD8Q9Y2G2 431 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 A6NHS1 94 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 AKR1C4P17516 323 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 OR1D4P47884 311 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 PTH2RP49190 550 aa17.06■□□□□ 0.32
COL18A1-204ENST00000400337 PGM2L1Q6PCE3 622 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms