RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 ERP29P30040 261 aaKnown RBP12.19□□□□□ -0.46
PRAME-201ENST00000398741 MAT2AP31153 395 aaKnown RBP12.19□□□□□ -0.46
PRAME-201ENST00000398741 TLX1P31314 330 aaPredicted RBP12.19□□□□□ -0.46
PRAME-201ENST00000398741 IGFALSP35858 605 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 TALDO1P37837 337 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 SOX9P48436 509 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 MTNR1BP49286 362 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 CTBP2P56545 445 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 RPS7P62081 194 aaKnown RBP12.19□□□□□ -0.46
PRAME-201ENST00000398741 SUZ12Q15022 739 aaKnown RBP12.19□□□□□ -0.46
PRAME-201ENST00000398741 TCEA2Q15560 299 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 CCNJQ5T5M9 372 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 ZNF776Q68DI1 518 aaPredicted RBP12.19□□□□□ -0.46
PRAME-201ENST00000398741 TIGD3Q6B0B8 471 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 TANGO2Q6ICL3 276 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 MEPCEQ7L2J0 689 aaKnown RBP12.19□□□□□ -0.46
PRAME-201ENST00000398741 APOOQ9BUR5 198 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 FN3KQ9H479 309 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 MED20Q9H944 212 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 ING3Q9NXR8 418 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 OBP2AQ9NY56 170 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 MAU2Q9Y6X3 613 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 MYO7AQ13402 2215 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 NUMA1Q14980 2115 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 TRPM6Q9BX84 2022 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 LOC102723532A0A0G2JNH3 316 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 ZC3H12DA2A288 527 aaKnown RBP12.19□□□□□ -0.46
PRAME-201ENST00000398741 ARHGEF9O43307 516 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 THBS1P07996 1170 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 IFI30P13284 250 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 ELK1P19419 428 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 ZNF136P52737 540 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 SLC16A1P53985 500 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 EEF1A1P68104 462 aaKnown RBP12.19□□□□□ -0.46
PRAME-201ENST00000398741 SIM1P81133 766 aaPredicted RBP12.19□□□□□ -0.46
PRAME-201ENST00000398741 DUSP8Q13202 625 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 DEFB134Q4QY38 66 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 YIF1BQ5BJH7 314 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 C9orf50Q5SZB4 431 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 FAM109BQ6ICB4 259 aaPredicted RBP12.19□□□□□ -0.46
PRAME-201ENST00000398741 SYCE2Q6PIF2 218 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 OR2L13Q8N349 312 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 TMEM99Q8N816 258 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 OR10H4Q8NGA5 316 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 PFN4Q8NHR9 129 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 TMEM239Q8WW34 195 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 TRIM63Q969Q1 353 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 UPRTQ96BW1 309 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 HS6ST2Q96MM7 605 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 WACQ9BTA9 647 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 TRPV5Q9NQA5 729 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 SIDT1Q9NXL6 827 aaKnown RBP12.19□□□□□ -0.46
PRAME-201ENST00000398741 NTMQ9P121 344 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 CENPVL1A0A0U1RR11 272 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 FAM86C2PA6NEL3 165 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 GRXCR1A8MXD5 290 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 C5orf67F2Z3F1 127 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 J3QRE1 110 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 B3GALT2O43825 422 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 SLC43A1O75387 559 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 ZGLP1P0C6A0 271 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 GKN3PP0CG01 181 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 F8A1P23610 371 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 FAPQ12884 760 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 SNAP47Q5SQN1 464 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 PRPF38BQ5VTL8 546 aaKnown RBP12.18□□□□□ -0.46
PRAME-201ENST00000398741 HBMQ6B0K9 141 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 CDK20Q8IZL9 346 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 ZNF619Q8N2I2 560 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 NT5CQ8TCD5 201 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 ZFPM2Q8WW38 1151 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 OR2M4Q96R27 311 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 GFM1Q96RP9 751 aaKnown RBP12.18□□□□□ -0.46
PRAME-201ENST00000398741 SDF2Q99470 211 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 KCNJ15Q99712 375 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 SLX1AQ9BQ83 275 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 PRSS27Q9BQR3 290 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 ADAP2Q9NPF8 381 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 DVL2O14641 736 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 RCBTB2O95199 551 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 DBIP07108 87 aaKnown RBP12.18□□□□□ -0.46
PRAME-201ENST00000398741 CHRNB1P11230 501 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 PRG2P13727 222 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 FUT1P19526 365 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 FCARP24071 287 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 FZD5Q13467 585 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 EFR3AQ14156 821 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 OR1Q1Q15612 314 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 C2orf27AQ580R0 203 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 ARL9Q6T311 187 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 VASH1Q7L8A9 365 aaPredicted RBP12.18□□□□□ -0.46
PRAME-201ENST00000398741 NANOGNBQ7Z5D8 188 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 LRRC28Q86X40 367 aaPredicted RBP12.18□□□□□ -0.46
PRAME-201ENST00000398741 RNF113BQ8IZP6 322 aaKnown RBP12.18□□□□□ -0.46
PRAME-201ENST00000398741 OR5W2Q8NH69 310 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 SERINC2Q96SA4 455 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 MARVELD1Q9BSK0 173 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 NDC1Q9BTX1 674 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 IFT27Q9BW83 186 aa12.18□□□□□ -0.46
PRAME-201ENST00000398741 SRMSQ9H3Y6 488 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms