RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 OR56A3Q8NH54 315 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 LHFPL5Q8TAF8 219 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 NEURL3Q96EH8 262 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 FUZQ9BT04 418 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 ALG8Q9BVK2 526 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 HINT3Q9NQE9 182 aaKnown RBP9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 KCMF1Q9P0J7 381 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 P2RX2Q9UBL9 471 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 TAC3Q9UHF0 121 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 ALPK2Q86TB3 2170 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 IGLV3-16A0A075B6K0 115 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 ARRDC5A6NEK1 342 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 H7C4K7 107 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 L7N2F9 121 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 GMDSO60547 372 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 RGS9O75916 674 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 HK1P19367 917 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 HLA-FP30511 346 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 C21orf58P58505 322 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 SIM1P81133 766 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 MELKQ14680 651 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 TCEA2Q15560 299 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 HYAL4Q2M3T9 481 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 VASNQ6EMK4 673 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 ZNF613Q6PF04 617 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 NLRC3Q7RTR2 1065 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 PLA2G15Q8NCC3 412 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 OR51L1Q8NGJ5 315 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 ZSWIM3Q96MP5 696 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 BBS4Q96RK4 519 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 BTBD1Q9H0C5 482 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 TTYH1Q9H313 450 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 CCDC86Q9H6F5 360 aaKnown RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 FGF20Q9NP95 211 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 SEMA4GQ9NTN9 838 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 MGAT4CQ9UBM8 478 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 ZNF69Q9UC07 566 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 FBXL2Q9UKC9 423 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 AK6Q9Y3D8 172 aaKnown RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 YIPF1Q9Y548 306 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 SPTBP11277 2137 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 A0A1W2PRQ8 180 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 FAM221BA6H8Z2 402 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 ZNF593O00488 134 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 NPC1O15118 1278 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 CHST10O43529 356 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 GFRA3O60609 400 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 PPM1BO75688 479 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 C1orf105O95561 183 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 CHRM4P08173 479 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 ELNP15502 786 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 PYCR1P32322 319 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 MAPK9P45984 424 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 NCBP2P52298 156 aaKnown RBP eCLIP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 UBE2MP61081 183 aaKnown RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 PDE7AQ13946 482 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 GSG1Q2KHT4 349 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 ZNF311Q5JNZ3 666 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 CDC73Q6P1J9 531 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 ZNF433Q8N7K0 673 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 C17orf47Q8NEP4 570 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 CXorf40BQ96DE9 158 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 NARS2Q96I59 477 aaKnown RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 EFCAB11Q9BUY7 163 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 KCNN2Q9H2S1 579 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 NDOR1Q9UHB4 597 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 COPS3Q9UNS2 423 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 BAIAP2Q9UQB8 552 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 RCE1Q9Y256 329 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 TMEM189-UBE2V1I3L0A0 370 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 ARPC1BO15143 372 aaKnown RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 ARPC5O15511 151 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 LEFTY1O75610 366 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 SOX30O94993 753 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 UCHL1P09936 223 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 CLUP10909 449 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 GABRR2P28476 465 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 CCND3P30281 292 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 RPL3P39023 403 aaKnown RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 CLDN12P56749 244 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 ZP1P60852 638 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 DEFA5Q01523 94 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 KCNC3Q14003 757 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 SLC36A2Q495M3 483 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 CD276Q5ZPR3 534 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 HBMQ6B0K9 141 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 OAFQ86UD1 273 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 SLC9B2Q86UD5 537 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 CACUL1Q86Y37 369 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 MORN4Q8NDC4 146 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 OR2T4Q8NH00 348 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 THAP4Q8WY91 577 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 OR5P2Q8WZ92 322 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 RFKQ969G6 155 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 MARC2Q969Z3 335 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 TM4SF18Q96CE8 201 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 SGTBQ96EQ0 304 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 METTL2AQ96IZ6 378 aaKnown RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 ZNF334Q9HCZ1 680 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 NUBP2Q9Y5Y2 271 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms