RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 KRT74Q7RTS7 529 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 ACOT11Q8WXI4 607 aaPredicted RBP12.96□□□□□ -0.33
NUP98-204ENST00000397004 RFT1Q96AA3 541 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 ELP4Q96EB1 424 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 B3GNT2Q9NY97 397 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 NLGN3Q9NZ94 848 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 PTGFRNQ9P2B2 879 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 CACNG2Q9Y698 323 aa12.96□□□□□ -0.33
NUP98-204ENST00000397004 HPXP02790 462 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 RHOP08100 348 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 GCGRP47871 477 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 MTNR1BP49286 362 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 BTG1P62324 171 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 CAMK2DQ13557 499 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 NTRK2Q16620 822 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 PRSS45Q7RTY3 260 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 ADCK2Q7Z695 626 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 GCDHQ92947 438 aaPredicted RBP12.96□□□□□ -0.34
NUP98-204ENST00000397004 PHF21AQ96BD5 680 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 SLC41A3Q96GZ6 507 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 BBS4Q96RK4 519 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 TTTY10Q9BZA0 68 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 DPH1Q9BZG8 443 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 FBXO34Q9NWN3 711 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 KCNE5Q9UJ90 142 aa12.96□□□□□ -0.34
NUP98-204ENST00000397004 ERI3O43414 337 aaKnown RBP12.95□□□□□ -0.34
NUP98-204ENST00000397004 SLC19A2O60779 497 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 NPR2P20594 1047 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 GIFP27352 417 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 PEBP1P30086 187 aaKnown RBP12.95□□□□□ -0.34
NUP98-204ENST00000397004 GAB4Q2WGN9 574 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 CCNJQ5T5M9 372 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 ABHD17CQ6PCB6 329 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 ARL9Q6T311 187 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 TMEM64Q6YI46 380 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 SLC39A5Q6ZMH5 540 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 MBOAT2Q6ZWT7 520 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 ERN2Q76MJ5 926 aaKnown RBP12.95□□□□□ -0.34
NUP98-204ENST00000397004 CXXC5Q7LFL8 322 aaKnown RBP12.95□□□□□ -0.34
NUP98-204ENST00000397004 LRRC28Q86X40 367 aaPredicted RBP12.95□□□□□ -0.34
NUP98-204ENST00000397004 SIAH3Q8IW03 269 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 HAVCR2Q8TDQ0 301 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 WBP1Q96G27 269 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 PEX11GQ96HA9 241 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 LRIG1Q96JA1 1093 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 SORCS2Q96PQ0 1159 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 INSM2Q96T92 566 aaPredicted RBP12.95□□□□□ -0.34
NUP98-204ENST00000397004 COQ7Q99807 217 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 ZNF223Q9UK11 482 aaPredicted RBP12.95□□□□□ -0.34
NUP98-204ENST00000397004 ADAM29Q9UKF5 820 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 LINC00862A6NCI5 91 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 LZTS3O60299 673 aaPredicted RBP12.95□□□□□ -0.34
NUP98-204ENST00000397004 LYPD3O95274 346 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 HIST1H1TP22492 207 aaPredicted RBP12.95□□□□□ -0.34
NUP98-204ENST00000397004 PITPNBP48739 271 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 DECR1Q16698 335 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 PXKQ7Z7A4 578 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 CACUL1Q86Y37 369 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 GANCQ8TET4 914 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 ZNF431Q8TF32 576 aaPredicted RBP12.95□□□□□ -0.34
NUP98-204ENST00000397004 BEX1Q9HBH7 125 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 MBNL1Q9NR56 388 aaKnown RBP12.95□□□□□ -0.34
NUP98-204ENST00000397004 UCKL1Q9NWZ5 548 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 ANKRD10Q9NXR5 420 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 GLTPQ9NZD2 209 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 APOBEC3BQ9UH17 382 aaKnown RBP12.95□□□□□ -0.34
NUP98-204ENST00000397004 OR1A2Q9Y585 309 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 TRPM6Q9BX84 2022 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 SYT5O00445 386 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 SCAMP1O15126 338 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 ARHGEF9O43307 516 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 CXCL14O95715 111 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 TCRBP04435 133 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 F3P13726 295 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 DRD2P14416 443 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 ATP5A1P25705 553 aaKnown RBP12.95□□□□□ -0.34
NUP98-204ENST00000397004 OR12D2P58182 307 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 SIM1P81133 766 aaPredicted RBP12.95□□□□□ -0.34
NUP98-204ENST00000397004 ZNF85Q03923 595 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 ST3GAL3Q11203 375 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 CAMK1Q14012 370 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 GNA13Q14344 377 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 C1orf53Q5VUE5 145 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 BHLHB9Q6PI77 547 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 SEZ6L2Q6UXD5 910 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 SPRED2Q7Z698 418 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 NUP43Q8NFH3 380 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 OR7G2Q8NG99 324 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 OR5J2Q8NH18 312 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 OR5W2Q8NH69 310 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 PIGXQ8TBF5 258 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 OSTF1Q92882 214 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 ORAI1Q96D31 301 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 MCHR1Q99705 422 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 PIGUQ9H490 435 aa12.95□□□□□ -0.34
NUP98-204ENST00000397004 A0A087WV48 116 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 FZD7O75084 574 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 GKN3PP0CG01 181 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 ACVR1BP36896 505 aa12.94□□□□□ -0.34
NUP98-204ENST00000397004 ATP12AP54707 1039 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms