RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 SHDQ96IW2 340 aa13.95□□□□□ -0.18
GPC3-202ENST00000394299 ZNF285Q96NJ3 590 aa13.95□□□□□ -0.18
GPC3-202ENST00000394299 UCK1Q9HA47 277 aa13.95□□□□□ -0.18
GPC3-202ENST00000394299 HHATLQ9HCP6 504 aa13.95□□□□□ -0.18
GPC3-202ENST00000394299 TBC1D23Q9NUY8 699 aa13.95□□□□□ -0.18
GPC3-202ENST00000394299 FLRT3Q9NZU0 649 aa13.95□□□□□ -0.18
GPC3-202ENST00000394299 PCDHGA3Q9Y5H0 932 aa13.95□□□□□ -0.18
GPC3-202ENST00000394299 CSNK1G3Q9Y6M4 447 aa13.95□□□□□ -0.18
GPC3-202ENST00000394299 RP1P56715 2156 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 PNMA8CA0A1B0GUJ8 204 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 FAM183AA6NL82 134 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 GNB5O14775 395 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 DSCR3O14972 297 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 BCAT2O15382 392 aaPredicted RBP13.94□□□□□ -0.18
GPC3-202ENST00000394299 FPR3P25089 353 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 FOXL2P58012 376 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 BNC1Q01954 994 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 ITGADQ13349 1161 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 NR1D2Q14995 579 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 OR2G6Q5TZ20 316 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 SLC35F3Q8IY50 421 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 ANKK1Q8NFD2 765 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 ANKRD19PQ9H560 264 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 FSCN3Q9NQT6 498 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 IL20Q9NYY1 176 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 TESQ9UGI8 421 aaKnown RBP13.94□□□□□ -0.18
GPC3-202ENST00000394299 ERGIC3Q9Y282 383 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 TMEM150CB9EJG8 249 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 CLDN4O14493 209 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 GPX5O75715 221 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 CT45A8P0DMV1 189 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 CT45A9P0DMV2 189 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 IFI30P13284 250 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 FOSL2P15408 326 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 CD79BP40259 229 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 GPR3P46089 330 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 CXCL12P48061 93 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 CSTF1Q05048 431 aaKnown RBP13.94□□□□□ -0.18
GPC3-202ENST00000394299 SPHARQ15513 63 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 CT45A2Q5DJT8 189 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 SLC35F1Q5T1Q4 408 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 ZNF620Q6ZNG0 422 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 ZNF595Q8IYB9 648 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 GJD3Q8N144 294 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 NANOGP1Q8N7R0 232 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 OR4C3Q8NH37 302 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 C9orf43Q8TAL5 461 aaPredicted RBP13.94□□□□□ -0.18
GPC3-202ENST00000394299 TMEM239Q8WW34 195 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 HOXB13Q92826 284 aaPredicted RBP13.94□□□□□ -0.18
GPC3-202ENST00000394299 OTULINQ96BN8 352 aa13.94□□□□□ -0.18
GPC3-202ENST00000394299 ZNF223Q9UK11 482 aaPredicted RBP13.94□□□□□ -0.18
GPC3-202ENST00000394299 MRPS33Q9Y291 106 aaKnown RBP13.94□□□□□ -0.18
GPC3-202ENST00000394299 CEP192Q8TEP8 1941 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 IGHV1OR21-1A0A087WYE8 117 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 GIMD1P0DJR0 217 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 BMP4P12644 408 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 STAT5AP42229 794 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 LIMK1P53667 647 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 SMARCD3Q6STE5 483 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 MRGPREQ86SM8 312 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 PRSS58Q8IYP2 241 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 OR6C4Q8NGE1 309 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 OR6Q1Q8NGQ2 317 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 NR4A3Q92570 626 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 RNFT2Q96EX2 444 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 TRMT61AQ96FX7 289 aaKnown RBP13.93□□□□□ -0.18
GPC3-202ENST00000394299 LMF2Q9BU23 707 aaKnown RBP13.93□□□□□ -0.18
GPC3-202ENST00000394299 OR10A5Q9H207 317 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 RERGLQ9H628 205 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 AKIP1Q9NQ31 210 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 MEPEQ9NQ76 525 aaPredicted RBP13.93□□□□□ -0.18
GPC3-202ENST00000394299 ZC3H12DA2A288 527 aaKnown RBP13.93□□□□□ -0.18
GPC3-202ENST00000394299 CCRL2O00421 344 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 SURF4O15260 269 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 COQ9O75208 318 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 OR2B3O76000 313 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 FOLR1P15328 257 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 DRD5P21918 477 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 SERPINB10P48595 397 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 EFNA3P52797 238 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 IGLV3-21P80748 117 aaPredicted RBP13.93□□□□□ -0.18
GPC3-202ENST00000394299 MEDAGQ5VYS4 303 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 FCRLBQ6BAA4 426 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 CROCCP3Q8IVE0 287 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 TMEM151BQ8IW70 566 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 CYP4Z2PQ8N1L4 340 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 FNDC8Q8TC99 324 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 TSLPQ969D9 159 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 DTNBP1Q96EV8 351 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 VMP1Q96GC9 406 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 ZDHHC12Q96GR4 267 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 TAPBPLQ9BX59 468 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 POLR2J2Q9GZM3 115 aaKnown RBP13.93□□□□□ -0.18
GPC3-202ENST00000394299 MED20Q9H944 212 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 PNO1Q9NRX1 252 aaKnown RBP13.93□□□□□ -0.18
GPC3-202ENST00000394299 NLGN3Q9NZ94 848 aa13.93□□□□□ -0.18
GPC3-202ENST00000394299 CLDN25C9JDP6 229 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 H3BMH7 237 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 CSF2RBP32927 897 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 ACAA2P42765 397 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms